RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 H7C1D1 291 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 NKRFO15226 690 aaKnown RBP eCLIP10.24□□□□□ -0.77
HPS4-203ENST00000402105 MAGEA9P43362 315 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 PDCLQ13371 301 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 FBXW10Q5XX13 1052 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 RRAGAQ7L523 313 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 SPATA20Q8TB22 786 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 PPM1EQ8WY54 764 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 CCDC47Q96A33 483 aaKnown RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 MS4A14Q96JA4 679 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 IFIH1Q9BYX4 1025 aaKnown RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 MKNK2Q9HBH9 465 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 C5P01031 1676 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 ARHGAP23Q9P227 1491 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 RIC1Q4ADV7 1423 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 PRPF3O43395 683 aaKnown RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 USO1O60763 962 aaKnown RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 HPDP32754 393 aaPredicted RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 TECP42680 631 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 ALX1Q15699 326 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 STAG2Q8N3U4 1231 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 NOC3LQ8WTT2 800 aaKnown RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 CNOT6LQ96LI5 555 aaKnown RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 TMEM60Q9H2L4 133 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 TBC1D7Q9P0N9 293 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 ABCC12Q96J65 1359 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 LMO7Q8WWI1 1683 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 NDUFAB1O14561 156 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 PPFIA4O75335 1185 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 ATP2C1P98194 919 aaPredicted RBP10.24□□□□□ -0.77
HPS4-203ENST00000402105 RASSF7Q02833 373 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 TUBB2AQ13885 445 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 LRRC41Q15345 812 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 CAVIN4Q5BKX8 364 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 DYNLL2Q96FJ2 89 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 TUBB2BQ9BVA1 445 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 CAPS2Q9BXY5 557 aa10.24□□□□□ -0.77
HPS4-203ENST00000402105 CCNT1O60563 726 aaKnown RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 TACC1O75410 805 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 ERLIN2O94905 339 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 BMP15O95972 392 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 TXKP42681 527 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 PAFAH1B1P43034 410 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 TFAP4Q01664 338 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 TRIM14Q14142 442 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 HLTFQ14527 1009 aaKnown RBP eCLIP10.23□□□□□ -0.77
HPS4-203ENST00000402105 SH3RF1Q7Z6J0 888 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 BLIDQ8IZY5 108 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 CCDC155Q8N6L0 562 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 PACSIN2Q9UNF0 486 aaPredicted RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 N4BP2Q86UW6 1770 aaPredicted RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 LGALS16A8MUM7 142 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 KRT14P02533 472 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 MCM3P25205 808 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 AMPD2Q01433 879 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 ANKRD40Q6AI12 368 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 PDXDC2PQ6P474 469 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 WDR59Q6PJI9 974 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 MAATS1Q7Z4T9 603 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 IRF2BP1Q8IU81 584 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 TCP11L1Q9NUJ3 509 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 CAPN6Q9Y6Q1 641 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 ZSCAN5CA6NGD5 496 aaPredicted RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 NUTM2BA6NNL0 878 aaPredicted RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 NUTM2EB1AL46 878 aaPredicted RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 HSF2BPO75031 334 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 TROAPQ12815 778 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 STK4Q13043 487 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 SEC23AQ15436 765 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 CCDC152Q4G0S7 254 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 ICE2Q659A1 982 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 CCNI2Q6ZMN8 369 aaPredicted RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 TMTC3Q6ZXV5 915 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 KLHL7Q8IXQ5 586 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 MYO1AQ9UBC5 1043 aa10.23□□□□□ -0.77
HPS4-203ENST00000402105 SAP30BPQ9UHR5 308 aaKnown RBP10.23□□□□□ -0.77
HPS4-203ENST00000402105 WDR17Q8IZU2 1322 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 EIF4A3P38919 411 aaKnown RBP10.22□□□□□ -0.77
HPS4-203ENST00000402105 IRAK1P51617 712 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 TRIM28Q13263 835 aaKnown RBP10.22□□□□□ -0.77
HPS4-203ENST00000402105 DISC1Q9NRI5 854 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 FAM169AQ9Y6X4 670 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 FAM205AQ6ZU69 1335 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 TMEM94Q12767 1356 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 USP17L3A6NCW0 530 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 USP17L4A6NCW7 530 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 KIAA0754O94854 1291 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 MAGEA1P43355 309 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 DNM2P50570 870 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 IQCEQ6IPM2 695 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 C8orf74Q6P047 294 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 USP17L1Q7RTZ2 530 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 DNAAF5Q86Y56 855 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 ADSSL1Q8N142 457 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 EHBP1Q8NDI1 1231 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 ARL8AQ96BM9 186 aa10.22□□□□□ -0.77
HPS4-203ENST00000402105 RBM28Q9NW13 759 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms