RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 CCDC174Q6PII3 467 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 PIBF1Q8WXW3 757 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 EFCC1Q9HA90 598 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 RAVER2Q9HCJ3 691 aaKnown RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 MKI67P46013 3256 aaKnown RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 ZNF536O15090 1300 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 SMCHD1A6NHR9 2005 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 GOLGA8BA8MQT2 603 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 CDC27P30260 824 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 ASPRV1Q53RT3 343 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 BTNL9Q6UXG8 535 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 TMTC2Q8N394 836 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 GPRC5AQ8NFJ5 357 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 TRIM47Q96LD4 638 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 AGBL1Q96MI9 1066 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 MOV10L1Q9BXT6 1211 aaKnown RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 SLC38A10Q9HBR0 1119 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 NCOA5Q9HCD5 579 aaKnown RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 MORF4L1Q9UBU8 362 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 RABGAP1Q9Y3P9 1069 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 FKTNO75072 461 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 DDAH1O94760 285 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 CD2BP2O95400 341 aaKnown RBP11.24□□□□□ -0.61
GABRB3-203ENST00000400188 LARGE1O95461 756 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 ADD1P35611 737 aaKnown RBP11.24□□□□□ -0.61
GABRB3-203ENST00000400188 STK3Q13188 491 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 GPATCH4Q5T3I0 446 aaKnown RBP11.24□□□□□ -0.61
GABRB3-203ENST00000400188 UTP14CQ5TAP6 766 aaKnown RBP11.24□□□□□ -0.61
GABRB3-203ENST00000400188 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 SRBD1Q8N5C6 995 aaKnown RBP11.24□□□□□ -0.61
GABRB3-203ENST00000400188 FANCBQ8NB91 859 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 CHURC1Q8WUH1 139 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 SPATC1LQ9H0A9 340 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 JMJD4Q9H9V9 463 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 TPCN1Q9ULQ1 816 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 MYPNQ86TC9 1320 aa11.24□□□□□ -0.61
GABRB3-203ENST00000400188 ZBTB43O43298 467 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 PLA2G6O60733 806 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 PDIA3P30101 505 aaKnown RBP11.23□□□□□ -0.61
GABRB3-203ENST00000400188 PSMC4P43686 418 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 CCT2P78371 535 aaKnown RBP11.23□□□□□ -0.61
GABRB3-203ENST00000400188 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 SNRNP48Q6IEG0 339 aaKnown RBP11.23□□□□□ -0.61
GABRB3-203ENST00000400188 FAM160B2Q86V87 743 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 HOMER2Q9NSB8 354 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 GOLGA8AA7E2F4 631 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 DHX16O60231 1041 aaKnown RBP11.23□□□□□ -0.61
GABRB3-203ENST00000400188 PPP1R11O60927 126 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-203ENST00000400188 ERCC3P19447 782 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 DDIT3P35638 169 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 STAT3P40763 770 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 EVCP57679 992 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 HOMER1Q86YM7 354 aa11.23□□□□□ -0.61
GABRB3-203ENST00000400188 CTCFLQ8NI51 663 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-203ENST00000400188 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
GABRB3-203ENST00000400188 METAP2P50579 478 aaKnown RBP eCLIP11.22□□□□□ -0.61
GABRB3-203ENST00000400188 CDC37Q16543 378 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-203ENST00000400188 RTN1Q16799 776 aa11.22□□□□□ -0.61
GABRB3-203ENST00000400188 USH1GQ495M9 461 aa11.22□□□□□ -0.61
GABRB3-203ENST00000400188 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
GABRB3-203ENST00000400188 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-203ENST00000400188 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
GABRB3-203ENST00000400188 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
GABRB3-203ENST00000400188 PIGSQ96S52 555 aa11.22□□□□□ -0.61
GABRB3-203ENST00000400188 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-203ENST00000400188 GABRQQ9UN88 632 aa11.22□□□□□ -0.61
GABRB3-203ENST00000400188 ZBED4O75132 1171 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 FMNL1O95466 1100 aaPredicted RBP11.21□□□□□ -0.61
GABRB3-203ENST00000400188 FUT2Q10981 343 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 ME3Q16798 604 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 QRICH1Q2TAL8 776 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 GPR142Q7Z601 462 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 NECAB1Q8N987 351 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 RIOX1Q9H6W3 641 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 DNAH12Q6ZR08 3092 aa11.21□□□□□ -0.61
GABRB3-203ENST00000400188 CALM1P0DP23 149 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 CALM2P0DP24 149 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 CALM3P0DP25 149 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 KIF5BP33176 963 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 PRKCZQ05513 592 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 ST3GAL1Q11201 340 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 MUM1L1Q5H9M0 696 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.62
GABRB3-203ENST00000400188 PHKBQ93100 1093 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 MAP3K14Q99558 947 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 CCPG1Q9ULG6 757 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 TRIM17Q9Y577 477 aa11.21□□□□□ -0.62
GABRB3-203ENST00000400188 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.62
GABRB3-203ENST00000400188 MGAMO43451 1857 aa11.2□□□□□ -0.62
GABRB3-203ENST00000400188 TNPO2O14787 897 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms