RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MYO1AQ9UBC5 1043 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 FAM184BQ9ULE4 1060 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 BACH1O14867 736 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 KRT86O43790 486 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 OPA1O60313 960 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 NTSR2O95665 410 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 RNASE9P60153 205 aaKnown RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 CCDC96Q2M329 555 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 B4GALNT4Q76KP1 1039 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 CCDC51Q96ER9 411 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 ZC3H4Q9UPT8 1303 aaKnown RBP19.06■□□□□ 0.64
PTPRA-205ENST00000399903 RPSAP08865 295 aaKnown RBP19.06■□□□□ 0.64
PTPRA-205ENST00000399903 GUCY2FP51841 1108 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 CCDC152Q4G0S7 254 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 HAUS4Q9H6D7 363 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 ODF2LQ9ULJ1 636 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 LAMA4Q16363 1823 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 ESYT3A0FGR9 886 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 TSEN2Q8NCE0 465 aaKnown RBP19.06■□□□□ 0.64
PTPRA-205ENST00000399903 CCDC114Q96M63 670 aa19.06■□□□□ 0.64
PTPRA-205ENST00000399903 GRIN2DO15399 1336 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 TRIM49BA6NDI0 452 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 SH2B2O14492 632 aaPredicted RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 KLRK1P26718 216 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 NNTQ13423 1086 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 LCORLQ8N3X6 602 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 ANKRD13CQ8N6S4 541 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 OR8K1Q8NGG5 319 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 SDR42E1Q8WUS8 393 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 EPB41L4AQ9HCS5 686 aaPredicted RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 MYO5AQ9Y4I1 1855 aaKnown RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 TRIM21P19474 475 aaKnown RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 SF3B2Q13435 895 aaKnown RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 CEP85LQ5SZL2 805 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 NELFBQ8WX92 580 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 MYH14Q7Z406 1995 aaKnown RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 SHOX2O60902 331 aaPredicted RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 FGFR2P21802 821 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 PBX1P40424 430 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 RILPL1Q5EBL4 403 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 CNPY4Q8N129 248 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 CELF1Q92879 486 aaKnown RBP19.05■□□□□ 0.64
PTPRA-205ENST00000399903 TACC3Q9Y6A5 838 aa19.05■□□□□ 0.64
PTPRA-205ENST00000399903 DOT1LQ8TEK3 1739 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 E7EVH7 732 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 MEFVO15553 781 aaPredicted RBP19.04■□□□□ 0.64
PTPRA-205ENST00000399903 PRDM1O75626 825 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 CUL4BQ13620 913 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 TBC1D9BQ66K14 1250 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 NAPBQ9H115 298 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 NUP98P52948 1817 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 LRP6O75581 1613 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 FAM237AA0A1B0GTK4 181 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 RCCD1A6NED2 376 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 MMP1P03956 469 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 ERCC3P19447 782 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 HERVK_113P62684 666 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 NEDD9Q14511 834 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 TTMPQ5BVD1 217 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 KRT26Q7Z3Y9 468 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 ZKSCAN4Q969J2 545 aaPredicted RBP19.04■□□□□ 0.64
PTPRA-205ENST00000399903 STRBPQ96SI9 672 aaKnown RBP19.04■□□□□ 0.64
PTPRA-205ENST00000399903 PLIN2Q99541 437 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 ZNHIT6Q9NWK9 470 aaKnown RBP19.04■□□□□ 0.64
PTPRA-205ENST00000399903 BCCIPQ9P287 314 aaKnown RBP eCLIP19.04■□□□□ 0.64
PTPRA-205ENST00000399903 GDAQ9Y2T3 454 aa19.04■□□□□ 0.64
PTPRA-205ENST00000399903 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
PTPRA-205ENST00000399903 MINDY4BA8MYZ0 360 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 PPP1R3GB7ZBB8 358 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 GOLGA8KD6RF30 607 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 CDKAL1Q5VV42 579 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 MAATS1Q7Z4T9 603 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 PRPF38AQ8NAV1 312 aaKnown RBP19.03■□□□□ 0.64
PTPRA-205ENST00000399903 TFCP2L1Q9NZI6 479 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 ELF1P32519 619 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 ADGRA1Q86SQ6 560 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 CCDC43Q96MW1 224 aaKnown RBP19.03■□□□□ 0.64
PTPRA-205ENST00000399903 KLC4Q9NSK0 619 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 MROH5Q6ZUA9 1318 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 CYP2D7A0A087X1C5 515 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 GOLGA6L7A0A1B0GV03 622 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 RNPC3Q96LT9 517 aaKnown RBP19.03■□□□□ 0.64
PTPRA-205ENST00000399903 VEZTQ9HBM0 779 aa19.03■□□□□ 0.64
PTPRA-205ENST00000399903 TRIM75PA6NK02 468 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 GNPATO15228 680 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 MAP3K12Q12852 859 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 PAK1Q13153 545 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 NT5DC1Q5TFE4 455 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 IQCEQ6IPM2 695 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 UBAC1Q9BSL1 405 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 CEP131Q9UPN4 1083 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 SRPRBQ9Y5M8 271 aaKnown RBP19.02■□□□□ 0.64
PTPRA-205ENST00000399903 SLC4A4Q9Y6R1 1079 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 TCRBV5S4A2TA0A5A2 114 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
PTPRA-205ENST00000399903 PSMD14O00487 310 aa19.02■□□□□ 0.64
PTPRA-205ENST00000399903 PDHBP11177 359 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms