RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 MYOGP15173 224 aa21.73■■□□□ 1.07
UFD1-202ENST00000399523 KATNBL1Q9H079 304 aa21.73■■□□□ 1.07
UFD1-202ENST00000399523 SLC4A7Q9Y6M7 1214 aa21.73■■□□□ 1.07
UFD1-202ENST00000399523 BRWD1Q9NSI6 2320 aa21.72■■□□□ 1.07
UFD1-202ENST00000399523 CYP2D7A0A087X1C5 515 aa21.72■■□□□ 1.07
UFD1-202ENST00000399523 ZNF316A6NFI3 1004 aaPredicted RBP21.72■■□□□ 1.07
UFD1-202ENST00000399523 CABYRO75952 493 aa21.72■■□□□ 1.07
UFD1-202ENST00000399523 ARMCX2Q7L311 632 aa21.72■■□□□ 1.07
UFD1-202ENST00000399523 VWCEQ96DN2 955 aa21.72■■□□□ 1.07
UFD1-202ENST00000399523 NOC4LQ9BVI4 516 aaKnown RBP21.72■■□□□ 1.07
UFD1-202ENST00000399523 SEZ6LQ9BYH1 1024 aa21.72■■□□□ 1.07
UFD1-202ENST00000399523 USP17L12C9JPN9 530 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 USP17L21D6R901 530 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 RAD21O60216 631 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 SKIV2LQ15477 1246 aaKnown RBP21.71■■□□□ 1.07
UFD1-202ENST00000399523 TMEM31Q5JXX7 168 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 CXCL17Q6UXB2 119 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 ERC1Q8IUD2 1116 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 RPUSD2Q8IZ73 545 aaKnown RBP21.71■■□□□ 1.07
UFD1-202ENST00000399523 PRPF38AQ8NAV1 312 aaKnown RBP21.71■■□□□ 1.07
UFD1-202ENST00000399523 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.71■■□□□ 1.077e-8■□□□□ 8.2
UFD1-202ENST00000399523 NUP88Q99567 741 aaPredicted RBP21.71■■□□□ 1.07
UFD1-202ENST00000399523 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.71■■□□□ 1.07
UFD1-202ENST00000399523 WNT8AQ9H1J5 351 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 MTCH2Q9Y6C9 303 aa21.71■■□□□ 1.07
UFD1-202ENST00000399523 GOLIM4O00461 696 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 CCL23P55773 120 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 BEX3Q00994 111 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 ITGA7Q13683 1181 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 ZKSCAN2Q63HK3 967 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 COG5Q9UP83 839 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 ASTN1O14525 1302 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 GRIN2DO15399 1336 aa21.7■■□□□ 1.06
UFD1-202ENST00000399523 GREB1LQ9C091 1923 aaPredicted RBP21.69■■□□□ 1.06
UFD1-202ENST00000399523 TLL1O43897 1013 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 MBD4O95243 580 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 ATP2A2P16615 1042 aaKnown RBP21.69■■□□□ 1.06
UFD1-202ENST00000399523 AMOTL1Q8IY63 956 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 CCDC144CPQ8IYA2 1237 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 CPXCR1Q8N123 301 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 ANKRD35Q8N283 1001 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 FBXO40Q9UH90 709 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 GNEQ9Y223 722 aaKnown RBP21.69■■□□□ 1.06
UFD1-202ENST00000399523 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
UFD1-202ENST00000399523 GTPBP6O43824 516 aaPredicted RBP21.68■■□□□ 1.06
UFD1-202ENST00000399523 GPR37L1O60883 481 aa21.68■■□□□ 1.06
UFD1-202ENST00000399523 ZBED4O75132 1171 aa21.68■■□□□ 1.06
UFD1-202ENST00000399523 TNFAIP2Q03169 654 aa21.68■■□□□ 1.06
UFD1-202ENST00000399523 CHST13Q8NET6 341 aa21.68■■□□□ 1.06
UFD1-202ENST00000399523 TRPV6Q9H1D0 765 aa21.68■■□□□ 1.06
UFD1-202ENST00000399523 ZBED9Q6R2W3 1325 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.67■■□□□ 1.06
UFD1-202ENST00000399523 F5H6K3 240 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 RFXAPO00287 272 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 B4GALT4O60513 344 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 ADD2P35612 726 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 SLC4A3P48751 1232 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 KLRC3Q07444 240 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 FSCN1Q16658 493 aaKnown RBP21.67■■□□□ 1.06
UFD1-202ENST00000399523 SLFNL1Q499Z3 407 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 TMEM67Q5HYA8 995 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 AGBL1Q96MI9 1066 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 DNAJC2Q99543 621 aaKnown RBP21.67■■□□□ 1.06
UFD1-202ENST00000399523 SLC38A10Q9HBR0 1119 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 RAVER2Q9HCJ3 691 aaKnown RBP21.67■■□□□ 1.06
UFD1-202ENST00000399523 NYAP2Q9P242 653 aa21.67■■□□□ 1.06
UFD1-202ENST00000399523 NDUFB10O96000 172 aa21.66■■□□□ 1.06
UFD1-202ENST00000399523 CTR9Q6PD62 1173 aa21.66■■□□□ 1.06
UFD1-202ENST00000399523 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
UFD1-202ENST00000399523 C11orf16Q9NQ32 467 aa21.66■■□□□ 1.06
UFD1-202ENST00000399523 LRRC37A2A6NM11 1700 aa21.66■■□□□ 1.06
UFD1-202ENST00000399523 ZBBXA8MT70 800 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 CA3P07451 260 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 PFKMP08237 780 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 OAZ1P54368 228 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 TTLL4Q14679 1199 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 NOL8Q76FK4 1167 aaKnown RBP21.65■■□□□ 1.06
UFD1-202ENST00000399523 TLK2Q86UE8 772 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 FAM133AQ8N9E0 248 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 RHPN1Q8TCX5 695 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 DDRGK1Q96HY6 314 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 SCLYQ96I15 445 aa21.65■■□□□ 1.06
UFD1-202ENST00000399523 CTDP1Q9Y5B0 961 aaPredicted RBP21.65■■□□□ 1.06
UFD1-202ENST00000399523 EPOPA6NHQ4 379 aa21.64■■□□□ 1.05
UFD1-202ENST00000399523 ZEB2O60315 1214 aa21.64■■□□□ 1.05
UFD1-202ENST00000399523 CNTN2Q02246 1040 aa21.64■■□□□ 1.05
UFD1-202ENST00000399523 KHSRPQ92945 711 aaKnown RBP eCLIP21.64■■□□□ 1.052e-12■■■□□ 15.4
UFD1-202ENST00000399523 HSP90AB4PQ58FF6 505 aa21.63■■□□□ 1.05
UFD1-202ENST00000399523 KRT40Q6A162 431 aa21.63■■□□□ 1.05
UFD1-202ENST00000399523 HLA-CQ95604 372 aa21.63■■□□□ 1.05
UFD1-202ENST00000399523 KIFC2Q96AC6 838 aa21.63■■□□□ 1.05
UFD1-202ENST00000399523 AP5M1Q9H0R1 490 aa21.63■■□□□ 1.05
UFD1-202ENST00000399523 PAG1Q9NWQ8 432 aa21.63■■□□□ 1.05
UFD1-202ENST00000399523 SMPD1P17405 629 aa21.62■■□□□ 1.05
UFD1-202ENST00000399523 RASA1P20936 1047 aa21.62■■□□□ 1.05
UFD1-202ENST00000399523 ITPRIPQ8IWB1 547 aa21.62■■□□□ 1.05
UFD1-202ENST00000399523 CLASRPQ8N2M8 674 aaKnown RBP21.62■■□□□ 1.05
UFD1-202ENST00000399523 ALDH8A1Q9H2A2 487 aaPredicted RBP21.62■■□□□ 1.05
UFD1-202ENST00000399523 CERS4Q9HA82 394 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms