RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 C2orf54Q08AI8 447 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 MTF1Q14872 753 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 C2CD5Q86YS7 1000 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 CCDC170Q8IYT3 715 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 ENOX1Q8TC92 643 aaKnown RBP16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 IFT74Q96LB3 600 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 CEP104O60308 925 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 N4BP1O75113 896 aaKnown RBP16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 CTNNA1P35221 906 aaKnown RBP16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 TMEM132AQ24JP5 1023 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 ERFEQ4G0M1 354 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 CYB5R4Q7L1T6 521 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 LRRN4CLQ8ND94 238 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 NUP58Q9BVL2 599 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 FAM207AQ9NSI2 230 aaPredicted RBP16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 STK38LQ9Y2H1 464 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 GUCY2DQ02846 1103 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 PTGDRQ13258 359 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 MORC3Q14149 939 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 TCP11Q8WWU5 503 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 SPATS2LQ9NUQ6 558 aaKnown RBP16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 FERMT2Q96AC1 680 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 ISCA1Q9BUE6 129 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 NNTQ13423 1086 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 SF3B2Q13435 895 aaKnown RBP16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 LMNTD2Q8IXW0 634 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 PNMA1Q8ND90 353 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 HYOU1Q9Y4L1 999 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 PANX2Q96RD6 677 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 SPATA31D1Q6ZQQ2 1576 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 ERCC5P28715 1186 aaPredicted RBP16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 CDC25AP30304 524 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 COPB1P53618 953 aaKnown RBP16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 STMN4Q9H169 189 aaPredicted RBP16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 PSD3Q9NYI0 1048 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 GGA1Q9UJY5 639 aa16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
RPRD1A-202ENST00000399022 SRGAP2O75044 1071 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 SLC7A5Q01650 507 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 DYMQ7RTS9 669 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 RASGRP4Q8TDF6 673 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 C1orf167Q5SNV9 1468 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 KCNJ6P48051 423 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 INF2Q27J81 1249 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 CCDC26Q8TAB7 109 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 RIN2Q8WYP3 895 aaPredicted RBP16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 FUT8Q9BYC5 575 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 ADGRG1Q9Y653 693 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 CXCR5P32302 372 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 PCDHB6Q9Y5E3 794 aa16.15■□□□□ 0.18
RPRD1A-202ENST00000399022 PPP6R2O75170 966 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 RFX5P48382 616 aaPredicted RBP16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 EPHB4P54760 987 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 TRIM68Q6AZZ1 485 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 SYMPKQ92797 1274 aaKnown RBP16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 LCMT1Q9UIC8 334 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 RASAL2Q9UJF2 1139 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 SUFUQ9UMX1 484 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 BUB1O43683 1085 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 IFNAR1P17181 557 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 ZNF446Q9NWS9 450 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 KIF20BQ96Q89 1820 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 FMNL1O95466 1100 aaPredicted RBP16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 CORO7P57737 925 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 BPIFA3Q9BQP9 254 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 FAM184BQ9ULE4 1060 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 NEDD4P46934 1319 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 SOS2Q07890 1332 aaPredicted RBP16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 TBCAO75347 108 aaKnown RBP16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 SCG2P13521 617 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 TSGA10IPQ3SY00 556 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 HIBCHQ6NVY1 386 aaPredicted RBP16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 RRAGAQ7L523 313 aa16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 GEMIN8Q9NWZ8 242 aaKnown RBP16.14■□□□□ 0.17
RPRD1A-202ENST00000399022 MB21D2Q8IYB1 491 aaPredicted RBP16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 LMBR1Q8WVP7 490 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 SETDB1Q15047 1291 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 NONOQ15233 471 aaKnown RBP eCLIP16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 INTS8Q75QN2 995 aaKnown RBP16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 TEX2Q8IWB9 1127 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 LRRC27Q9C0I9 530 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 NLRC4Q9NPP4 1024 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 ERVV-1B6SEH8 477 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 NDUFA10O95299 355 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 CDC27P30260 824 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 SLC20A2Q08357 652 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms