RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 NBPF5PQ86XG9 351 aaPredicted RBP21.94■■□□□ 1.1
COL13A1-205ENST00000398978 MAPKAPK5Q8IW41 473 aa21.94■■□□□ 1.1
COL13A1-205ENST00000398978 ARPP21Q9UBL0 812 aaPredicted RBP21.94■■□□□ 1.1
COL13A1-205ENST00000398978 LUC7L2Q9Y383 392 aaKnown RBP21.94■■□□□ 1.1
COL13A1-205ENST00000398978 SPATA31A1Q5TZJ5 1347 aa21.94■■□□□ 1.1
COL13A1-205ENST00000398978 KLRC4O43908 158 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 SPAG1Q07617 926 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 WDR59Q6PJI9 974 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 RMND1Q9NWS8 449 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 TSPY3P0CV98 308 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 TSPY8P0CW00 308 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 HERVK_113P62684 666 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 RCCD1A6NED2 376 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 MAP2K7O14733 419 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 CCDC122Q5T0U0 273 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 OR8K1Q8NGG5 319 aa21.93■■□□□ 1.1
COL13A1-205ENST00000398978 PLCG1P19174 1290 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 CALML3P27482 149 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 FAM182BQ5T319 152 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 NLRP3Q96P20 1036 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 H7C1D1 291 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 FECHP22830 423 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 AMIGO3Q86WK7 504 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 UIMC1Q96RL1 719 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 LACRTQ9GZZ8 138 aa21.92■■□□□ 1.1
COL13A1-205ENST00000398978 STK4Q13043 487 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 TXNRD1Q16881 649 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 GSPT2Q8IYD1 628 aaKnown RBP21.91■■□□□ 1.1
COL13A1-205ENST00000398978 CSGALNACT2Q8N6G5 542 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 CCDC102AQ96A19 550 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 FAN1Q9Y2M0 1017 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 STRCQ7RTU9 1775 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 ZNF185O15231 689 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 TRIM21P19474 475 aaKnown RBP21.91■■□□□ 1.1
COL13A1-205ENST00000398978 MRPS25P82663 173 aaKnown RBP21.91■■□□□ 1.1
COL13A1-205ENST00000398978 C12orf60Q5U649 245 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 ARL6IP4Q66PJ3 421 aaKnown RBP21.91■■□□□ 1.1
COL13A1-205ENST00000398978 MMS19Q96T76 1030 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 CALCOCO1Q9P1Z2 691 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 ANKIB1Q9P2G1 1089 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 LGALS16A8MUM7 142 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 CCNT1O60563 726 aaKnown RBP21.91■■□□□ 1.1
COL13A1-205ENST00000398978 PCP11498 1178 aaKnown RBP21.91■■□□□ 1.1
COL13A1-205ENST00000398978 TECP42680 631 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 AMPD2Q01433 879 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 L1RE1Q9UN81 338 aa21.91■■□□□ 1.1
COL13A1-205ENST00000398978 MACROD2A1Z1Q3 448 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 PDE4DQ08499 809 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 USP17L2Q6R6M4 530 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 KIAA1328Q86T90 577 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 MSANTD4Q8NCY6 345 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 SMCR8Q8TEV9 937 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-205ENST00000398978 TUBGCP2Q9BSJ2 902 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 MAGEC2Q9UBF1 373 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-205ENST00000398978 PLEKP08567 350 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-205ENST00000398978 ANKRD40Q6AI12 368 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 HDXQ7Z353 690 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 SETDB2Q96T68 719 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 DUSP9Q99956 384 aaKnown RBP21.9■■□□□ 1.1
COL13A1-205ENST00000398978 TMEM47Q9BQJ4 181 aa21.9■■□□□ 1.1
COL13A1-205ENST00000398978 RASSF10A6NK89 507 aa21.89■■□□□ 1.1
COL13A1-205ENST00000398978 LRRIQ3A6PVS8 624 aaPredicted RBP21.89■■□□□ 1.1
COL13A1-205ENST00000398978 ASIC1P78348 528 aa21.89■■□□□ 1.1
COL13A1-205ENST00000398978 TAF3Q5VWG9 929 aa21.89■■□□□ 1.1
COL13A1-205ENST00000398978 KRT26Q7Z3Y9 468 aa21.89■■□□□ 1.1
COL13A1-205ENST00000398978 ZNF507Q8TCN5 953 aa21.89■■□□□ 1.1
COL13A1-205ENST00000398978 DRC1Q96MC2 740 aa21.89■■□□□ 1.1
COL13A1-205ENST00000398978 RAB21Q9UL25 225 aa21.89■■□□□ 1.1
COL13A1-205ENST00000398978 M0R2N6 131 aa21.89■■□□□ 1.09
COL13A1-205ENST00000398978 STXBP3O00186 592 aa21.89■■□□□ 1.09
COL13A1-205ENST00000398978 PSMA7O14818 248 aa21.89■■□□□ 1.09
COL13A1-205ENST00000398978 MAPK8IP2Q13387 824 aaPredicted RBP21.89■■□□□ 1.09
COL13A1-205ENST00000398978 CASP8Q14790 479 aa21.89■■□□□ 1.09
COL13A1-205ENST00000398978 CLEC4GQ6UXB4 293 aa21.89■■□□□ 1.09
COL13A1-205ENST00000398978 ZNF444Q8N0Y2 327 aaPredicted RBP21.89■■□□□ 1.09
COL13A1-205ENST00000398978 NAPAP54920 295 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 TBC1D8BQ0IIM8 1120 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 TSR1Q2NL82 804 aaKnown RBP21.88■■□□□ 1.09
COL13A1-205ENST00000398978 TTI2Q6NXR4 508 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 CABP7Q86V35 215 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 ATP2B2Q01814 1243 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 PDE4CQ08493 712 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 SBK1Q52WX2 424 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 UBA5Q9GZZ9 404 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 SLC39A2Q9NP94 309 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 LDHBP07195 334 aaKnown RBP21.88■■□□□ 1.09
COL13A1-205ENST00000398978 MTIF2P46199 727 aaKnown RBP21.88■■□□□ 1.09
COL13A1-205ENST00000398978 IRX5P78411 483 aaPredicted RBP21.88■■□□□ 1.09
COL13A1-205ENST00000398978 GRM4Q14833 912 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 NFIXQ14938 502 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 FAM98CQ17RN3 349 aaKnown RBP21.88■■□□□ 1.09
COL13A1-205ENST00000398978 WHAMMP3Q1A5X7 153 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 TMEM260Q9NX78 707 aa21.88■■□□□ 1.09
COL13A1-205ENST00000398978 BIN2Q9UBW5 565 aaPredicted RBP21.88■■□□□ 1.09
COL13A1-205ENST00000398978 KLRF2D3W0D1 207 aa21.87■■□□□ 1.09
COL13A1-205ENST00000398978 TRIM14Q14142 442 aa21.87■■□□□ 1.09
COL13A1-205ENST00000398978 CNOT6LQ96LI5 555 aaKnown RBP21.87■■□□□ 1.09
COL13A1-205ENST00000398978 ERLIN1O75477 346 aa21.87■■□□□ 1.09
COL13A1-205ENST00000398978 TNNT3P45378 269 aaPredicted RBP21.87■■□□□ 1.09
COL13A1-205ENST00000398978 PIP4K2BP78356 416 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms