RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 DGKHQ86XP1 1220 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 PNMA1Q8ND90 353 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 HNRNPLLQ8WVV9 542 aaKnown RBP28.78■■■□□ 2.2
COL13A1-203ENST00000398969 SLF1Q9BQI6 1058 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 ANKRD2Q9GZV1 360 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 ZCCHC17Q9NP64 241 aaKnown RBP28.78■■■□□ 2.2
COL13A1-203ENST00000398969 RAB21Q9UL25 225 aa28.78■■■□□ 2.2
COL13A1-203ENST00000398969 TRIM49BA6NDI0 452 aa28.77■■■□□ 2.2
COL13A1-203ENST00000398969 GYS1P13807 737 aa28.77■■■□□ 2.2
COL13A1-203ENST00000398969 TUBB4BP68371 445 aa28.77■■■□□ 2.2
COL13A1-203ENST00000398969 DTHD1Q6ZMT9 781 aa28.77■■■□□ 2.2
COL13A1-203ENST00000398969 MAP2K7O14733 419 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 TMED8Q6PL24 325 aaPredicted RBP28.76■■■□□ 2.19
COL13A1-203ENST00000398969 PNKPQ96T60 521 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 CCDC88AQ3V6T2 1871 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 CCDC194A0A1B0GVG4 234 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 PP2D1A8MPX8 630 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 TFRCP02786 760 aaKnown RBP28.76■■■□□ 2.19
COL13A1-203ENST00000398969 USP5P45974 858 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 KCNB1Q14721 858 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 GRM4Q14833 912 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 ANKS1AQ92625 1134 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 CHP1Q99653 195 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 JAG2Q9Y219 1238 aa28.76■■■□□ 2.19
COL13A1-203ENST00000398969 PMS1P54277 932 aaKnown RBP28.75■■■□□ 2.19
COL13A1-203ENST00000398969 WHAMMP3Q1A5X7 153 aa28.75■■■□□ 2.19
COL13A1-203ENST00000398969 TMEM60Q9H2L4 133 aa28.75■■■□□ 2.19
COL13A1-203ENST00000398969 PCDHA6Q9UN73 950 aa28.75■■■□□ 2.19
COL13A1-203ENST00000398969 PCDHA8Q9Y5H6 950 aa28.75■■■□□ 2.19
COL13A1-203ENST00000398969 C12orf60Q5U649 245 aa28.74■■■□□ 2.19
COL13A1-203ENST00000398969 MB21D1Q8N884 522 aa28.74■■■□□ 2.19
COL13A1-203ENST00000398969 MKRN1Q9UHC7 482 aaKnown RBP28.74■■■□□ 2.19
COL13A1-203ENST00000398969 MAD2L2Q9UI95 211 aa28.74■■■□□ 2.19
COL13A1-203ENST00000398969 REXO2Q9Y3B8 237 aaKnown RBP28.74■■■□□ 2.19
COL13A1-203ENST00000398969 LGALS16A8MUM7 142 aa28.74■■■□□ 2.19
COL13A1-203ENST00000398969 KLRC4O43908 158 aa28.74■■■□□ 2.19
COL13A1-203ENST00000398969 BEND6Q5SZJ8 279 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-203ENST00000398969 PRR5LQ6MZQ0 368 aa28.74■■■□□ 2.19
COL13A1-203ENST00000398969 DZIP1Q86YF9 867 aaKnown RBP28.74■■■□□ 2.19
COL13A1-203ENST00000398969 PROM2Q8N271 834 aa28.74■■■□□ 2.19
COL13A1-203ENST00000398969 EPN1Q9Y6I3 576 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-203ENST00000398969 TTC26A0AVF1 554 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 NDUFA10O95299 355 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 EEF1GP26641 437 aaKnown RBP28.73■■■□□ 2.19
COL13A1-203ENST00000398969 SLC35G1Q2M3R5 365 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 TXNRD3Q86VQ6 643 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 DAGLBQ8NCG7 672 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 RASSF8Q8NHQ8 419 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 TXNRD1Q16881 649 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 DYNLL2Q96FJ2 89 aa28.73■■■□□ 2.19
COL13A1-203ENST00000398969 A0A1W2PQC6 194 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 MYL1P05976 194 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 GNAQP50148 359 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 ST5P78524 1137 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 AMPD2Q01433 879 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 INF2Q27J81 1249 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 OR8K1Q8NGG5 319 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 ZNF507Q8TCN5 953 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 DNAJC7Q99615 494 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 CCSER1Q9C0I3 900 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 THAP9Q9H5L6 903 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 CTAGE15A4D2H0 777 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 CTAGE8P0CG41 777 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 UBA7P41226 1012 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 NT5C2P49902 561 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 ZNF772Q68DY9 489 aaPredicted RBP28.72■■■□□ 2.19
COL13A1-203ENST00000398969 CTAGE6Q86UF2 777 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 CTAGE4Q8IX94 777 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 CCDC148Q8NFR7 591 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 KBTBD4Q9NVX7 518 aa28.72■■■□□ 2.19
COL13A1-203ENST00000398969 RHOBTB3O94955 611 aa28.71■■■□□ 2.19
COL13A1-203ENST00000398969 CALCOCO1Q9P1Z2 691 aa28.71■■■□□ 2.19
COL13A1-203ENST00000398969 H3BQF6 201 aa28.71■■■□□ 2.19
COL13A1-203ENST00000398969 CYTH3O43739 400 aa28.71■■■□□ 2.19
COL13A1-203ENST00000398969 GRAPQ13588 217 aa28.71■■■□□ 2.19
COL13A1-203ENST00000398969 SPTY2D1Q68D10 685 aaPredicted RBP28.71■■■□□ 2.19
COL13A1-203ENST00000398969 GALNT17Q6IS24 598 aa28.71■■■□□ 2.19
COL13A1-203ENST00000398969 GIMAP8Q8ND71 665 aaPredicted RBP28.71■■■□□ 2.19
COL13A1-203ENST00000398969 GRAPLQ8TC17 118 aaPredicted RBP28.71■■■□□ 2.19
COL13A1-203ENST00000398969 LUC7L2Q9Y383 392 aaKnown RBP28.71■■■□□ 2.19
COL13A1-203ENST00000398969 ERLIN1O75477 346 aa28.7■■■□□ 2.18
COL13A1-203ENST00000398969 STIM1Q13586 685 aa28.7■■■□□ 2.18
COL13A1-203ENST00000398969 TRIM47Q96LD4 638 aa28.7■■■□□ 2.18
COL13A1-203ENST00000398969 PLIN2Q99541 437 aa28.7■■■□□ 2.18
COL13A1-203ENST00000398969 MYO6Q9UM54 1294 aa28.7■■■□□ 2.18
COL13A1-203ENST00000398969 ROBO3Q96MS0 1386 aa28.7■■■□□ 2.18
COL13A1-203ENST00000398969 IRS2Q9Y4H2 1338 aa28.7■■■□□ 2.18
COL13A1-203ENST00000398969 USP17L3A6NCW0 530 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 USP17L4A6NCW7 530 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 STXBP3O00186 592 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 PSMA7O14818 248 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 RHOXF2BP0C7M4 288 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 USP17L1Q7RTZ2 530 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 HEATR3Q7Z4Q2 680 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 RHOXF2Q9BQY4 288 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 BARHL2Q9NY43 387 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 CAPN11Q9UMQ6 739 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 LAD1O00515 517 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 SERPINB2P05120 415 aa28.69■■■□□ 2.18
COL13A1-203ENST00000398969 SEMA3FQ13275 785 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms