RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ZNF713Q8N859 430 aaPredicted RBP15.62■□□□□ 0.09
PRAME-202ENST00000398743 NELFBQ8WX92 580 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 VAT1LQ9HCJ6 419 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 MTMR4Q9NYA4 1195 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 OR52Z1P0C646 297 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 PDHBP11177 359 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 NEK8Q86SG6 692 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 ANKRD20A12PQ8NF67 263 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 NAA15Q9BXJ9 866 aaKnown RBP15.62■□□□□ 0.09
PRAME-202ENST00000398743 RIOX1Q9H6W3 641 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 LIMA1Q9UHB6 759 aaKnown RBP15.62■□□□□ 0.09
PRAME-202ENST00000398743 MYH1P12882 1939 aa15.62■□□□□ 0.09
PRAME-202ENST00000398743 ITIH6Q6UXX5 1313 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 ESYT2A0FGR8 921 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 LRRC10BA6NIK2 292 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 COBLO75128 1261 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 RBL2Q08999 1139 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 SEMA3FQ13275 785 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 KCNB1Q14721 858 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 KRT31Q15323 416 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 ASPRV1Q53RT3 343 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 TOGARAM2Q6ZUX3 1019 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 REXO1Q8N1G1 1221 aaKnown RBP15.61■□□□□ 0.09
PRAME-202ENST00000398743 UBA5Q9GZZ9 404 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 CUEDC2Q9H467 287 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 MAGEF1Q9HAY2 307 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 KBTBD4Q9NVX7 518 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 TTF2Q9UNY4 1162 aaKnown RBP15.61■□□□□ 0.09
PRAME-202ENST00000398743 GDAQ9Y2T3 454 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 FOCADQ5VW36 1801 aa15.61■□□□□ 0.09
PRAME-202ENST00000398743 SRGNP10124 158 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 NPR1P16066 1061 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 CCT6AP40227 531 aaKnown RBP15.6■□□□□ 0.09
PRAME-202ENST00000398743 PRCPP42785 496 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 ORC2Q13416 577 aaPredicted RBP15.6■□□□□ 0.09
PRAME-202ENST00000398743 PROM2Q8N271 834 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 CERS5Q8N5B7 392 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 FRMPD2Q68DX3 1309 aaPredicted RBP15.6■□□□□ 0.09
PRAME-202ENST00000398743 N4BP3O15049 544 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 TPM1P09493 284 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 AKR1B1P15121 316 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 TCP11X2Q5H9J9 407 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 CABP7Q86V35 215 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 CNGA4Q8IV77 575 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 TBCKQ8TEA7 893 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 DDX4Q9NQI0 724 aaKnown RBP15.6■□□□□ 0.09
PRAME-202ENST00000398743 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.6■□□□□ 0.09
PRAME-202ENST00000398743 SWAP70Q9UH65 585 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 SERPINB13Q9UIV8 391 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 MAPK8IP1Q9UQF2 711 aa15.6■□□□□ 0.09
PRAME-202ENST00000398743 V9GYY5 206 aaPredicted RBP15.6■□□□□ 0.09
PRAME-202ENST00000398743 IGKV6D-41A0A0C4DH26 115 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 KCNJ18B7U540 433 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 MFAP3LO75121 409 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 KCNJ12Q14500 433 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 KMT5BQ4FZB7 885 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 DPP8Q6V1X1 898 aaPredicted RBP15.59■□□□□ 0.09
PRAME-202ENST00000398743 ADSSL1Q8N142 457 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 LRRC47Q8N1G4 583 aaKnown RBP15.59■□□□□ 0.09
PRAME-202ENST00000398743 PLIN2Q99541 437 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.59■□□□□ 0.092e-28■□□□□ 9.6
PRAME-202ENST00000398743 H7C1D1 291 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 TTLL1O95922 423 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 SNHG28P0DPA3 235 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 ALDH1B1P30837 517 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 COPB1P53618 953 aaKnown RBP15.59■□□□□ 0.09
PRAME-202ENST00000398743 STIM1Q13586 685 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 CPLX3Q8WVH0 158 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 CCDC51Q96ER9 411 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 USP40Q9NVE5 1235 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 BIN2Q9UBW5 565 aaPredicted RBP15.59■□□□□ 0.09
PRAME-202ENST00000398743 MYO3BQ8WXR4 1341 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 QSER1Q2KHR3 1735 aa15.59■□□□□ 0.09
PRAME-202ENST00000398743 KLRC4O43908 158 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 RHOBTB3O94955 611 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 GYPCP04921 128 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 CCDC175P0C221 793 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 PLCG1P19174 1290 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 CASP14P31944 242 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 EIF6P56537 245 aaKnown RBP15.58■□□□□ 0.08
PRAME-202ENST00000398743 ELF2Q15723 593 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 JAKMIP3Q5VZ66 844 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 TMX4Q9H1E5 349 aaPredicted RBP15.58■□□□□ 0.08
PRAME-202ENST00000398743 VPS16Q9H269 839 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 SOWAHDA6NJG2 315 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 DOK7Q18PE1 504 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 GIMAP8Q8ND71 665 aaPredicted RBP15.58■□□□□ 0.08
PRAME-202ENST00000398743 DESI2Q9BSY9 194 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 SRRTQ9BXP5 876 aaKnown RBP15.58■□□□□ 0.08
PRAME-202ENST00000398743 TAB2Q9NYJ8 693 aa15.58■□□□□ 0.08
PRAME-202ENST00000398743 ANKRD31Q8N7Z5 1873 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 C10orf71Q711Q0 1435 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 G3V3G9 751 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 PSMA7O14818 248 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 FANCGO15287 622 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 PDE6BP35913 854 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 TECP42680 631 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 SCNN1DP51172 638 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms