RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 A0A0U1RQJ8 604 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 N4BP3O15049 544 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 UBA7P41226 1012 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 FXR1P51114 621 aaKnown RBP eCLIP20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 RAD9BQ6WBX8 426 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 DAGLBQ8NCG7 672 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ATRIPQ8WXE1 791 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 IRX2Q9BZI1 471 aaPredicted RBP20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 TAB2Q9NYJ8 693 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 TRIM49BA6NDI0 452 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 C6orf229H3BNL8 230 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 GYPCP04921 128 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PARP1P09874 1014 aaKnown RBP20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 NT5C2P49902 561 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 TBC1D16Q8TBP0 767 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 LRRC15Q8TF66 581 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CARD6Q9BX69 1037 aa20.68■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CHRM1P11229 460 aaPredicted RBP20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 LETM2Q2VYF4 491 aa20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 KRT222Q8N1A0 295 aa20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 NEDD1Q8NHV4 660 aa20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 DDX60LQ5H9U9 1706 aaKnown RBP20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 MFAP3LO75121 409 aa20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CASQ1P31415 396 aa20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 UBA5Q9GZZ9 404 aa20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 RMND1Q9NWS8 449 aa20.67■□□□□ 0.9
CHRFAM7A-202ENST00000397827 SMCO2A6NFE2 343 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 GALNT17Q6IS24 598 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ZMYND12Q9H0C1 365 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 LZTFL1Q9NQ48 299 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 GOLGA6L9A6NEM1 432 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CCNT1O60563 726 aaKnown RBP20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PICALMQ13492 652 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ARHGAP29Q52LW3 1261 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 MNS1Q8NEH6 495 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 SPZ1Q9BXG8 430 aa20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 LIMA1Q9UHB6 759 aaKnown RBP20.66■□□□□ 0.9
CHRFAM7A-202ENST00000397827 KCNJ18B7U540 433 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 CCDC175P0C221 793 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 COPB1P53618 953 aaKnown RBP20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PMS1P54277 932 aaKnown RBP20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 KCNJ12Q14500 433 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 TCP11X2Q5H9J9 407 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 MEX3CQ5U5Q3 659 aaKnown RBP20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 SEPT12Q8IYM1 358 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PIGSQ96S52 555 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 LZTS2Q9BRK4 669 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 F8W031 263 aaPredicted RBP20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 RNF225M0QZC1 329 aaPredicted RBP20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 RIMBP2O15034 1052 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 GTF2IP78347 998 aa20.65■□□□□ 0.9
CHRFAM7A-202ENST00000397827 LRRC10BA6NIK2 292 aa20.64■□□□□ 0.9
CHRFAM7A-202ENST00000397827 USP17L5A8MUK1 530 aa20.64■□□□□ 0.9
CHRFAM7A-202ENST00000397827 DDR1Q08345 913 aa20.64■□□□□ 0.9
CHRFAM7A-202ENST00000397827 ADGRG1Q9Y653 693 aa20.64■□□□□ 0.9
CHRFAM7A-202ENST00000397827 PLCG2P16885 1265 aa20.64■□□□□ 0.89
CHRFAM7A-202ENST00000397827 UBXN4Q92575 508 aa20.64■□□□□ 0.89
CHRFAM7A-202ENST00000397827 RRP36Q96EU6 259 aaKnown RBP20.64■□□□□ 0.89
CHRFAM7A-202ENST00000397827 FRMPD2Q68DX3 1309 aaPredicted RBP20.64■□□□□ 0.89
CHRFAM7A-202ENST00000397827 BBOX1O75936 387 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 EIF6P56537 245 aaKnown RBP20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TXNRD1Q16881 649 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ADSSL1Q8N142 457 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 KIFC2Q96AC6 838 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ZNF446Q9NWS9 450 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 BIN2Q9UBW5 565 aaPredicted RBP20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 MYH8P13535 1937 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 KLRC4O43908 158 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 NONOQ15233 471 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 CLEC10AQ8IUN9 316 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 EEF2KMTQ96G04 330 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 CCSER1Q9C0I3 900 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 SEC63Q9UGP8 760 aaKnown RBP20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 MYH1P12882 1939 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 JAKMIP3Q5VZ66 844 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 IRF2BP1Q8IU81 584 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 CNGA4Q8IV77 575 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TSPYL1Q9H0U9 437 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 C6orf50Q9HD87 102 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 KBTBD4Q9NVX7 518 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 DAGLAQ9Y4D2 1042 aa20.63■□□□□ 0.89
CHRFAM7A-202ENST00000397827 GAKO14976 1311 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 H2AFXP16104 143 aaPredicted RBP20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 PLCG1P19174 1290 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 ITIH6Q6UXX5 1313 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 FAM163AQ96GL9 167 aaPredicted RBP20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 NUP88Q99567 741 aaPredicted RBP20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 NAA15Q9BXJ9 866 aaKnown RBP20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 EPC1Q9H2F5 836 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 SPATA31A6Q5VVP1 1343 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TADA3O75528 432 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 OR52Z1P0C646 297 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 TECP42680 631 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 MAP3K9P80192 1104 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 SPAG1Q07617 926 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 KRT25Q7Z3Z0 450 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 CABP7Q86V35 215 aa20.62■□□□□ 0.89
CHRFAM7A-202ENST00000397827 LRRC47Q8N1G4 583 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms