RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 PHLDB3Q6NSJ2 640 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 DNAJC10Q8IXB1 793 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 RNF10Q8N5U6 811 aaKnown RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 LGR6Q9HBX8 967 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 MYO1AQ9UBC5 1043 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 MAPK8IP1Q9UQF2 711 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 FAN1Q9Y2M0 1017 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 TMEM2Q9UHN6 1383 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 CEP170Q5SW79 1584 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 K7ENM7 598 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 SEC24BO95487 1268 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 KRT3P12035 628 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 CTNNA1P35221 906 aaKnown RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 RINT1Q6NUQ1 792 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 PLCD3Q8N3E9 789 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 MYL10Q9BUA6 226 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 TRIM31Q9BZY9 425 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 KLHL14Q9P2G3 628 aa6.85□□□□□ -1.31
PGBD4-201ENST00000397766 ARMCX3Q9UH62 379 aaPredicted RBP6.85□□□□□ -1.31
PGBD4-201ENST00000397766 MYOM2P54296 1465 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 EFCAB8A8MWE9 144 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 XPOTO43592 962 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 SPATA1Q5VX52 437 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 CASC4Q6P4E1 433 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 C2CD5Q86YS7 1000 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 GLG1Q92896 1179 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 Q9H521 79 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 TBC1D7Q9P0N9 293 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 STK17AQ9UEE5 414 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 DDX25Q9UHL0 483 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 PPIP5K2O43314 1243 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 OAS2P29728 719 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 MFAP3P55082 362 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 DMP1Q13316 513 aaPredicted RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 KRT71Q3SY84 523 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 CCDC38Q502W7 563 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 FBXO11Q86XK2 927 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 KLHDC4Q8TBB5 520 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 AK8Q96MA6 479 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 MED10Q9BTT4 135 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 XPO4Q9C0E2 1151 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 AFG3L2Q9Y4W6 797 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 WDR17Q8IZU2 1322 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 KDM5AP29375 1690 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 PPP6R2O75170 966 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 A1BGP04217 495 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 PHKG2P15735 406 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 LMNB1P20700 586 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 USP14P54578 494 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 ME3Q16798 604 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 UBE2Q2Q8WVN8 375 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 FAM207AQ9NSI2 230 aaPredicted RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 CPSF2Q9P2I0 782 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 HESX1Q9UBX0 185 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 PRKAG2Q9UGJ0 569 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 KRIT1O00522 736 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 ASPRV1Q53RT3 343 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 MFSD14BQ5SR56 506 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 MAP7D3Q8IWC1 876 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 CCDC17Q96LX7 622 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 MED4Q9NPJ6 270 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 WDR70Q9NW82 654 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 ABT1Q9ULW3 272 aaKnown RBP6.84□□□□□ -1.31
PGBD4-201ENST00000397766 PASKQ96RG2 1323 aa6.84□□□□□ -1.31
PGBD4-201ENST00000397766 OATP04181 439 aa6.84□□□□□ -1.32
PGBD4-201ENST00000397766 RPN1P04843 607 aaKnown RBP6.84□□□□□ -1.32
PGBD4-201ENST00000397766 PRPSAP1Q14558 356 aa6.84□□□□□ -1.32
PGBD4-201ENST00000397766 ARHGAP44Q17R89 818 aa6.84□□□□□ -1.32
PGBD4-201ENST00000397766 FAM47AQ5JRC9 791 aa6.84□□□□□ -1.32
PGBD4-201ENST00000397766 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.84□□□□□ -1.32
PGBD4-201ENST00000397766 PDE6AP16499 860 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ADCY8P40145 1251 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 TMED8Q6PL24 325 aaPredicted RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 CCDC13Q8IYE1 715 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 CPXCR1Q8N123 301 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 RETREG2Q8NC44 543 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 CNKSR1Q969H4 720 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 MRRFQ96E11 262 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ZNF496Q96IT1 587 aaPredicted RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 SPZ1Q9BXG8 430 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 LARSQ9P2J5 1176 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 PPP2R2CQ9Y2T4 447 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ATP8B1O43520 1251 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 SRGAP2BP0DMP2 458 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ATF2P15336 505 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 GCFC2P16383 781 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 TMOD1P28289 359 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 RNASE9P60153 205 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 RNASELQ05823 741 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 MAEAQ7L5Y9 396 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 CDKL2Q92772 493 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 FOXP1Q9H334 677 aaPredicted RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 NOC2LQ9Y3T9 749 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 TNKSO95271 1327 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ABCC12Q96J65 1359 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 NPHP4O75161 1426 aaPredicted RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 JAK2O60674 1132 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 GADD45BO75293 160 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms