RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ZKSCAN8Q15776 578 aaPredicted RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 TTC38Q5R3I4 469 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SRGAP1Q7Z6B7 1085 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 TMEM139Q8IV31 216 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 PRPF38AQ8NAV1 312 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 ACRBPQ8NEB7 543 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 FAXDC2Q96IV6 333 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CALR3Q96L12 384 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 CDC5LQ99459 802 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 TRIM6Q9C030 488 aaPredicted RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 TAB2Q9NYJ8 693 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 ANKIB1Q9P2G1 1089 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 GDAQ9Y2T3 454 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 RNF225M0QZC1 329 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 ARHGAP6O43182 974 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 RNF40O75150 1001 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 CCT5P48643 541 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 NAIF1Q69YI7 327 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 WWC2Q6AWC2 1192 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 RAD9BQ6WBX8 426 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 PPFIBP1Q86W92 1011 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 TMTC2Q8N394 836 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 MSANTD4Q8NCY6 345 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 SMARCC1Q92922 1105 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 NUP88Q99567 741 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 SLC24A3Q9HC58 644 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 ABCB6Q9NP58 842 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 CEP131Q9UPN4 1083 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 ATRNO75882 1429 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 MYH13Q9UKX3 1938 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 COL1A1P02452 1464 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 ECM29Q5VYK3 1845 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 N4BP3O15049 544 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 FXR1P51114 621 aaKnown RBP eCLIP5.62□□□□□ -1.51
SSR1-202ENST00000397511 TFAP4Q01664 338 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 GRIK5Q16478 980 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 IL17AQ16552 155 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 HEATR3Q7Z4Q2 680 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 AMIGO3Q86WK7 504 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 NBPF5PQ86XG9 351 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 MLKLQ8NB16 471 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 SP7Q8TDD2 431 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 PHF20Q9BVI0 1012 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 RNF26Q9BY78 433 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 DCP1AQ9NPI6 582 aaPredicted RBP5.62□□□□□ -1.51
SSR1-202ENST00000397511 ODF2LQ9ULJ1 636 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 PNPLA7Q6ZV29 1317 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 STK36Q9NRP7 1315 aa5.62□□□□□ -1.51
SSR1-202ENST00000397511 CHD4Q14839 1912 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 A0A1B0GUA9 196 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 AKR1B15C9JRZ8 316 aaPredicted RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 MPHOSPH10O00566 681 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 ENC1O14682 589 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 KIAA0754O94854 1291 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 ZNF18P17022 549 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 PAX7P23759 505 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 SARSP49591 514 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 PLCD1P51178 756 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 EIF6P56537 245 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 PREPLQ4J6C6 727 aaPredicted RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 ZNF569Q5MCW4 686 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 DZIP1Q86YF9 867 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 LINC00116Q8NCU8 138 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 HPS3Q969F9 1004 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 NSUN4Q96CB9 384 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 ANKZF1Q9H8Y5 726 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 SUGCTQ9HAC7 445 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 MKNK2Q9HBH9 465 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 TRIM10Q9UDY6 481 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 CAPN7Q9Y6W3 813 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 FAM205AQ6ZU69 1335 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 HAX1O00165 279 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 GNPATO15228 680 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 RHOXF2BP0C7M4 288 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 HIBADHP31937 336 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 TUBB2AQ13885 445 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 NR1I3Q14994 352 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 INF2Q27J81 1249 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 PARP10Q53GL7 1025 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 TMCO4Q5TGY1 634 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 AP1ARQ63HQ0 302 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 TTC19Q6DKK2 380 aaPredicted RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 TYW1BQ6NUM6 668 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 MAPKAPK5Q8IW41 473 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 ENOX1Q8TC92 643 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 TGFBRAP1Q8WUH2 860 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 ZKSCAN4Q969J2 545 aaPredicted RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 KIFC2Q96AC6 838 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 GDAP1L1Q96MZ0 367 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 MTRQ99707 1265 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 SLF1Q9BQI6 1058 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 RHOXF2Q9BQY4 288 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 TUBB2BQ9BVA1 445 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 VIPAS39Q9H9C1 493 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 DACH1Q9UI36 760 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 MYH14Q7Z406 1995 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 MYH6P13533 1939 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 XDHP47989 1333 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 KDM4FA0A1W2PPD8 638 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms