RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 V9GY48 417 aaPredicted RBP27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 COL11A1P12107 1806 aaPredicted RBP27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 MYH6P13533 1939 aa27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 LBX1P52954 281 aa27.33■■□□□ 1.97
TSPAN4-203ENST00000397397 CCDC174Q6PII3 467 aa27.33■■□□□ 1.97
TSPAN4-203ENST00000397397 MTMR8Q96EF0 704 aa27.33■■□□□ 1.97
TSPAN4-203ENST00000397397 RNF26Q9BY78 433 aaPredicted RBP27.33■■□□□ 1.97
TSPAN4-203ENST00000397397 SLC38A10Q9HBR0 1119 aa27.33■■□□□ 1.97
TSPAN4-203ENST00000397397 SEC63Q9UGP8 760 aaKnown RBP27.33■■□□□ 1.97
TSPAN4-203ENST00000397397 PTPDC1A2A3K4 754 aa27.33■■□□□ 1.96
TSPAN4-203ENST00000397397 PRPF3O43395 683 aaKnown RBP27.33■■□□□ 1.96
TSPAN4-203ENST00000397397 JAK2O60674 1132 aa27.33■■□□□ 1.96
TSPAN4-203ENST00000397397 FMNL1O95466 1100 aaPredicted RBP27.33■■□□□ 1.96
TSPAN4-203ENST00000397397 ALDH1A1P00352 501 aa27.33■■□□□ 1.96
TSPAN4-203ENST00000397397 LBX2Q6XYB7 198 aa27.33■■□□□ 1.96
TSPAN4-203ENST00000397397 GTF3C2Q8WUA4 911 aaPredicted RBP27.33■■□□□ 1.96
TSPAN4-203ENST00000397397 A0A0G2JMZ2 1700 aa27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 ZBTB5O15062 677 aa27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 QRICH1Q2TAL8 776 aa27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 MB21D1Q8N884 522 aa27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 DDX11Q96FC9 970 aa27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 PAGR1Q9BTK6 254 aa27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 ZFYVE28Q9HCC9 887 aa27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.32■■□□□ 1.96
TSPAN4-203ENST00000397397 PNMA6FA0A0J9YX94 578 aa27.31■■□□□ 1.96
TSPAN4-203ENST00000397397 POTEEQ6S8J3 1075 aa27.31■■□□□ 1.96
TSPAN4-203ENST00000397397 REPS2Q8NFH8 660 aa27.31■■□□□ 1.96
TSPAN4-203ENST00000397397 RBM27Q9P2N5 1060 aaKnown RBP27.31■■□□□ 1.96
TSPAN4-203ENST00000397397 ORC3Q9UBD5 711 aaPredicted RBP27.31■■□□□ 1.96
TSPAN4-203ENST00000397397 STK36Q9NRP7 1315 aa27.3■■□□□ 1.96
TSPAN4-203ENST00000397397 GCLCP48506 637 aaPredicted RBP27.3■■□□□ 1.96
TSPAN4-203ENST00000397397 CPXCR1Q8N123 301 aa27.3■■□□□ 1.96
TSPAN4-203ENST00000397397 SMARCC2Q8TAQ2 1214 aa27.3■■□□□ 1.96
TSPAN4-203ENST00000397397 RAVER2Q9HCJ3 691 aaKnown RBP27.3■■□□□ 1.96
TSPAN4-203ENST00000397397 FOXD4L1Q9NU39 408 aa27.3■■□□□ 1.96
TSPAN4-203ENST00000397397 BTBD7Q9P203 1132 aa27.3■■□□□ 1.96
TSPAN4-203ENST00000397397 CA12O43570 354 aa27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 PEX10O60683 326 aa27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 HSP90AA1P07900 732 aaKnown RBP27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 PLS1Q14651 629 aa27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 TMEM132BQ14DG7 1078 aa27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 RBPJLQ9UBG7 517 aa27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 SMC3Q9UQE7 1217 aa27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 RABGAP1Q9Y3P9 1069 aa27.29■■□□□ 1.96
TSPAN4-203ENST00000397397 CNMDO75829 334 aa27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 DEXIO95424 95 aa27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 HMGN5P82970 282 aaKnown RBP27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 CRHR2Q13324 411 aa27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 FBXO11Q86XK2 927 aa27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 INTS4Q96HW7 963 aaKnown RBP27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 PRDM10Q9NQV6 1147 aa27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 ZNF536O15090 1300 aa27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 ADGRA2Q96PE1 1338 aa27.28■■□□□ 1.96
TSPAN4-203ENST00000397397 ICAM1P05362 532 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 SLC4A3P48751 1232 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 OAZ1P54368 228 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 PKN1Q16512 942 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 PFKFB3Q16875 520 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 ANKRD13CQ8N6S4 541 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 AGBL1Q96MI9 1066 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 AMNQ9BXJ7 453 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 TXNRD2Q9NNW7 524 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 RNF186Q9NXI6 227 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 ZNF214Q9UL59 606 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 CCPG1Q9ULG6 757 aa27.27■■□□□ 1.96
TSPAN4-203ENST00000397397 TLR2O60603 784 aa27.26■■□□□ 1.95
TSPAN4-203ENST00000397397 PPP1R11O60927 126 aaPredicted RBP27.26■■□□□ 1.95
TSPAN4-203ENST00000397397 SCG2P13521 617 aa27.26■■□□□ 1.95
TSPAN4-203ENST00000397397 FDPSP14324 419 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-203ENST00000397397 SPRYD3Q8NCJ5 442 aa27.26■■□□□ 1.95
TSPAN4-203ENST00000397397 CPA4Q9UI42 421 aa27.26■■□□□ 1.95
TSPAN4-203ENST00000397397 STAT3P40763 770 aa27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 USH1GQ495M9 461 aa27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 SNRNP48Q6IEG0 339 aaKnown RBP27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 HEATR3Q7Z4Q2 680 aa27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 WASF1Q92558 559 aa27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 GPKOWQ92917 476 aaPredicted RBP eCLIP27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 TEX13BQ9BXU2 312 aa27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 PNMA2Q9UL42 364 aa27.25■■□□□ 1.95
TSPAN4-203ENST00000397397 ATP2A1O14983 1001 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 TRPA1O75762 1119 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 TAL1P17542 331 aaPredicted RBP27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 GJB2P29033 226 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 ERVK-9P63128 1117 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 ERVK-24P63145 666 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 FAM184AQ8NB25 1140 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 GPRC5AQ8NFJ5 357 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 COA7Q96BR5 231 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 SPATC1LQ9H0A9 340 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 MORF4L1Q9UBU8 362 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 PCDHA1Q9Y5I3 950 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 TRAF1Q13077 416 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 Q3C1V9 767 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 WWC2Q6AWC2 1192 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 AIFM3Q96NN9 605 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 ALG1Q9BT22 464 aa27.24■■□□□ 1.95
TSPAN4-203ENST00000397397 SMCHD1A6NHR9 2005 aa27.23■■□□□ 1.95
TSPAN4-203ENST00000397397 TBC1D8O95759 1140 aa27.23■■□□□ 1.95
TSPAN4-203ENST00000397397 ALAS1P13196 640 aa27.23■■□□□ 1.95
TSPAN4-203ENST00000397397 FAM110CQ1W6H9 321 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms