RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SHANK3Q9BYB0 1731 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 GRIN2DO15399 1336 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 PNPLA7Q6ZV29 1317 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 PDE2AO00408 941 aaPredicted RBP26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 PDXDC2PQ6P474 469 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 OR8K1Q8NGG5 319 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 SAMM50Q9Y512 469 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 SLIT2O94813 1529 aa26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 MMP14P50281 582 aa26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 SPAG1Q07617 926 aa26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 POTEDQ86YR6 584 aa26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 MAP2K2P36507 400 aa26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 ATP2C1P98194 919 aaPredicted RBP26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 CHRNDQ07001 517 aa26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 FAM184BQ9ULE4 1060 aa26.82■■□□□ 1.88
CSNK1E-203ENST00000396832 TIAM2Q8IVF5 1701 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 RPN1P04843 607 aaKnown RBP26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 USP8P40818 1118 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 NUP98P52948 1817 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 C2orf54Q08AI8 447 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 TROAPQ12815 778 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 GBP6Q6ZN66 633 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 AENQ8WTP8 325 aaKnown RBP26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 RWDD2AQ9UIY3 292 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 DUSP10Q9Y6W6 482 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 MYH13Q9UKX3 1938 aa26.81■■□□□ 1.88
CSNK1E-203ENST00000396832 PRPF3O43395 683 aaKnown RBP26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 SND1Q7KZF4 910 aaKnown RBP eCLIP26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 PARP1P09874 1014 aaKnown RBP26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 ERCC3P19447 782 aa26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 STAT6P42226 847 aa26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 KIAA1328Q86T90 577 aa26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 IQCA1Q86XH1 822 aa26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 LUC7L2Q9Y383 392 aaKnown RBP26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 IGHMBP2P38935 993 aaKnown RBP26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 ANKRD18AQ8IVF6 992 aa26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 TNFRSF25Q93038 417 aa26.8■■□□□ 1.88
CSNK1E-203ENST00000396832 CNTNAP5Q8WYK1 1306 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 MACROD2A1Z1Q3 448 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 USP17L12C9JPN9 530 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 USP17L21D6R901 530 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 CYP27A1Q02318 531 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 FKBP15Q5T1M5 1219 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 AGPAT5Q9NUQ2 364 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 B4DLN1 442 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 TSR1Q2NL82 804 aaKnown RBP26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 IRF2BP1Q8IU81 584 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 RRP36Q96EU6 259 aaKnown RBP26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 SH3GL2Q99962 352 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 JADE2Q9NQC1 790 aa26.79■■□□□ 1.88
CSNK1E-203ENST00000396832 GOLGA8KD6RF30 607 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 KRT86O43790 486 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 CYP2D6P10635 497 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 TMTC3Q6ZXV5 915 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 EHBP1Q8NDI1 1231 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 DOCK2Q92608 1830 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 FAM205AQ6ZU69 1335 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 PSEN1P49768 467 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 WDR59Q6PJI9 974 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 CNPY4Q8N129 248 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 TRIM47Q96LD4 638 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 PCMTD1Q96MG8 357 aaPredicted RBP26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 CAPN7Q9Y6W3 813 aa26.78■■□□□ 1.88
CSNK1E-203ENST00000396832 RCCD1A6NED2 376 aa26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 NKRFO15226 690 aaKnown RBP eCLIP26.77■■□□□ 1.887e-9■■■□□ 16.7
CSNK1E-203ENST00000396832 KRT83P78385 493 aa26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 PSMB7Q99436 277 aa26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 DNAJC7Q99615 494 aa26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 LACRTQ9GZZ8 138 aa26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 GTPBP6O43824 516 aaPredicted RBP26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 ZNF658Q5TYW1 1059 aaPredicted RBP26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 CCDC70Q6NSX1 233 aa26.77■■□□□ 1.88
CSNK1E-203ENST00000396832 AMOTL1Q8IY63 956 aa26.76■■□□□ 1.87
CSNK1E-203ENST00000396832 SMCR8Q8TEV9 937 aaPredicted RBP26.76■■□□□ 1.87
CSNK1E-203ENST00000396832 HDAC7Q8WUI4 952 aa26.76■■□□□ 1.87
CSNK1E-203ENST00000396832 IDEP14735 1019 aa26.76■■□□□ 1.87
CSNK1E-203ENST00000396832 ZNF34Q8IZ26 560 aa26.76■■□□□ 1.87
CSNK1E-203ENST00000396832 PRPF38AQ8NAV1 312 aaKnown RBP26.76■■□□□ 1.87
CSNK1E-203ENST00000396832 SECISBP2LQ93073 1101 aaKnown RBP26.76■■□□□ 1.87
CSNK1E-203ENST00000396832 COL4A1P02462 1669 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 EZH2Q15910 746 aaKnown RBP26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 BCL9LQ86UU0 1499 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 ATP6V1AP38606 617 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 IQCEQ6IPM2 695 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 MB21D1Q8N884 522 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 RIOK1Q9BRS2 568 aaKnown RBP26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 BCORQ6W2J9 1755 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 NDUFAB1O14561 156 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 OPA1O60313 960 aa26.75■■□□□ 1.87
CSNK1E-203ENST00000396832 SCG2P13521 617 aa26.74■■□□□ 1.87
CSNK1E-203ENST00000396832 TRIM21P19474 475 aaKnown RBP26.74■■□□□ 1.87
CSNK1E-203ENST00000396832 ZNF384Q8TF68 577 aa26.74■■□□□ 1.87
CSNK1E-203ENST00000396832 ARL8AQ96BM9 186 aa26.74■■□□□ 1.87
CSNK1E-203ENST00000396832 LRRC1Q9BTT6 524 aa26.74■■□□□ 1.87
CSNK1E-203ENST00000396832 DMGDHQ9UI17 866 aaKnown RBP26.74■■□□□ 1.87
CSNK1E-203ENST00000396832 CAPN11Q9UMQ6 739 aa26.74■■□□□ 1.87
CSNK1E-203ENST00000396832 TAF1P21675 1872 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 ZNF662Q6ZS27 426 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 BTG4Q9NY30 223 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms