RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PSRC1Q6PGN9 363 aaPredicted RBP20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 KIFC2Q96AC6 838 aa20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 LENG1Q96BZ8 264 aaPredicted RBP20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 TIFAQ96CG3 184 aa20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 NACAP1Q9BZK3 213 aa20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 MTIF3Q9H2K0 278 aaKnown RBP20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 EYSQ5T1H1 3165 aa20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 PARP14Q460N5 1801 aa20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 BAZ2AQ9UIF9 1905 aaKnown RBP20.86■□□□□ 0.93
EXOSC3-202ENST00000396521 TDO2P48775 406 aa20.86■□□□□ 0.93
EXOSC3-202ENST00000396521 PDE4BQ07343 736 aa20.86■□□□□ 0.93
EXOSC3-202ENST00000396521 GRIN2CQ14957 1233 aa20.86■□□□□ 0.93
EXOSC3-202ENST00000396521 CHURC1Q8WUH1 139 aa20.86■□□□□ 0.93
EXOSC3-202ENST00000396521 RAVER2Q9HCJ3 691 aaKnown RBP20.86■□□□□ 0.93
EXOSC3-202ENST00000396521 ASB14A6NK59 587 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 GPAA1O43292 621 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 BMP3P12645 472 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 SLC4A3P48751 1232 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 TKFCQ3LXA3 575 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 TJAP1Q5JTD0 557 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 RASIP1Q5U651 963 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 ARMCX2Q7L311 632 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 FAM160B2Q86V87 743 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 OSBP2Q969R2 916 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 CEP95Q96GE4 821 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 PRDM6Q9NQX0 595 aa20.85■□□□□ 0.93
EXOSC3-202ENST00000396521 PATL2C9JE40 543 aaKnown RBP20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 PLA2G6O60733 806 aa20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 APPP05067 770 aa20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 STAT2P52630 851 aa20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 TMEM240Q5SV17 173 aa20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 CCDC144CPQ8IYA2 1237 aa20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 NEDD1Q8NHV4 660 aa20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 GAS2L1Q99501 681 aaPredicted RBP20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 ACAD9Q9H845 621 aa20.84■□□□□ 0.93
EXOSC3-202ENST00000396521 COL11A1P12107 1806 aaPredicted RBP20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 ZEB2O60315 1214 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 TSPY3P0CV98 308 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 TSPY8P0CW00 308 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 RAB30Q15771 203 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 AKNAD1Q5T1N1 836 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 SLFN13Q68D06 897 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 FAM126BQ8IXS8 530 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 MIER1Q8N108 512 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 GMCL1Q96IK5 515 aa20.83■□□□□ 0.93
EXOSC3-202ENST00000396521 PLXNA1Q9UIW2 1896 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 MYADML2A6NDP7 307 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 TNFAIP2Q03169 654 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 FAM133AQ8N9E0 248 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 FGD4Q96M96 766 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 RCAN3Q9UKA8 241 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 Q9Y3F1 56 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 PLIN4Q96Q06 1357 aa20.82■□□□□ 0.92
EXOSC3-202ENST00000396521 GREB1LQ9C091 1923 aaPredicted RBP20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 CD4P01730 458 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 CSF2RAP15509 400 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 C16orf59Q7L2K0 433 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 IFNL3Q8IZI9 196 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 STK11IPQ8N1F8 1099 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 SLC43A3Q8NBI5 491 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 STAG1Q8WVM7 1258 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 ATXN2LQ8WWM7 1075 aaKnown RBP20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 KATNBL1Q9H079 304 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 AP5M1Q9H0R1 490 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 DCTPP1Q9H773 170 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 IL23AQ9NPF7 189 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 MSRAQ9UJ68 235 aa20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 SPTBN5Q9NRC6 3674 aaKnown RBP20.81■□□□□ 0.92
EXOSC3-202ENST00000396521 TMEM232C9JQI7 657 aa20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 SMARCA5O60264 1052 aaPredicted RBP20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 IQSEC1Q6DN90 963 aa20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 NOL8Q76FK4 1167 aaKnown RBP20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 HERVK_113Q902F9 699 aa20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 PBX4Q9BYU1 374 aa20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 EPB41L4AQ9HCS5 686 aaPredicted RBP20.8■□□□□ 0.92
EXOSC3-202ENST00000396521 ERC2O15083 957 aa20.79■□□□□ 0.92
EXOSC3-202ENST00000396521 CTAGE5O15320 804 aa20.79■□□□□ 0.92
EXOSC3-202ENST00000396521 ADCY6O43306 1168 aa20.79■□□□□ 0.92
EXOSC3-202ENST00000396521 PRDM1O75626 825 aa20.79■□□□□ 0.92
EXOSC3-202ENST00000396521 SLC1A4P43007 532 aa20.79■□□□□ 0.92
EXOSC3-202ENST00000396521 LRRC47Q8N1G4 583 aaKnown RBP20.79■□□□□ 0.92
EXOSC3-202ENST00000396521 RNF146Q9NTX7 359 aa20.79■□□□□ 0.92
EXOSC3-202ENST00000396521 TTC41PQ6P2S7 1318 aa20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 LOC102724159A0A0B4J2E5 919 aa20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 FGBP02675 491 aa20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 TFAP4Q01664 338 aa20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 IKQ13123 557 aaPredicted RBP20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 PWP2Q15269 919 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 FSCN1Q16658 493 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 RPUSD2Q8IZ73 545 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 NAPBQ9H115 298 aa20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 A1CFQ9NQ94 594 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 HOMER2Q9NSB8 354 aa20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 GNEQ9Y223 722 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 MYH7P12883 1935 aa20.78■□□□□ 0.92
EXOSC3-202ENST00000396521 CNTN2Q02246 1040 aa20.77■□□□□ 0.92
EXOSC3-202ENST00000396521 ITGA7Q13683 1181 aa20.77■□□□□ 0.92
EXOSC3-202ENST00000396521 RCSD1Q6JBY9 416 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms