RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SAMD15Q9P1V8 674 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 CDC23Q9UJX2 597 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 ANKRD62A6NC57 917 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 ZRANB2O95218 330 aaKnown RBP eCLIP9.34□□□□□ -0.91
NDE1-202ENST00000396355 ATP1A3P13637 1013 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 CASP7P55210 303 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 SLC8A3P57103 927 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
NDE1-202ENST00000396355 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 MYH15Q9Y2K3 1946 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 VAV2P52735 878 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 TSNAXIP1Q2TAA8 658 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 TNNI3KQ59H18 835 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 CCDC178Q5BJE1 867 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 OLFML2BQ68BL8 750 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 RNF10Q8N5U6 811 aaKnown RBP9.34□□□□□ -0.91
NDE1-202ENST00000396355 CDK5RAP3Q96JB5 506 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 COPRSQ9NQ92 184 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 MYO1AQ9UBC5 1043 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 FPGT-TNNI3KV9GXZ4 949 aa9.34□□□□□ -0.91
NDE1-202ENST00000396355 H0YIN7 160 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 JAK2O60674 1132 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 TFRCP02786 760 aaKnown RBP9.33□□□□□ -0.92
NDE1-202ENST00000396355 CHRNA5P30532 468 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 RABL6Q3YEC7 729 aaPredicted RBP9.33□□□□□ -0.92
NDE1-202ENST00000396355 USPL1Q5W0Q7 1092 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 CYB5D1Q6P9G0 228 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 ARHGEF1Q92888 912 aaKnown RBP9.33□□□□□ -0.92
NDE1-202ENST00000396355 IMPACTQ9P2X3 320 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 PHLPP2Q6ZVD8 1323 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 CCDC13Q8IYE1 715 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 CEP70Q8NHQ1 597 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 SRP68Q9UHB9 627 aaKnown RBP9.33□□□□□ -0.92
NDE1-202ENST00000396355 CHMP2BQ9UQN3 213 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 TSPY2A6NKD2 308 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 TSPY3P0CV98 308 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 TSPY8P0CW00 308 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 TSPY1Q01534 308 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 SLC7A5Q01650 507 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 GKAP1Q5VSY0 366 aaPredicted RBP9.33□□□□□ -0.92
NDE1-202ENST00000396355 CCDC24Q8N4L8 307 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 ARFGAP2Q8N6H7 521 aa9.33□□□□□ -0.92
NDE1-202ENST00000396355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
NDE1-202ENST00000396355 UBLCP1Q8WVY7 318 aaPredicted RBP9.33□□□□□ -0.92
NDE1-202ENST00000396355 PARP4Q9UKK3 1724 aaKnown RBP9.33□□□□□ -0.92
NDE1-202ENST00000396355 UBR2Q8IWV8 1755 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 LSM1O15116 133 aaKnown RBP9.32□□□□□ -0.92
NDE1-202ENST00000396355 LUC7L3O95232 432 aaKnown RBP9.32□□□□□ -0.92
NDE1-202ENST00000396355 CYP21A2P08686 494 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 IFNAR2P48551 515 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 NNTQ13423 1086 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 CCDC122Q5T0U0 273 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 STOX1Q6ZVD7 989 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
NDE1-202ENST00000396355 LINC00116Q8NCU8 138 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 DDX20Q9UHI6 824 aaKnown RBP9.32□□□□□ -0.92
NDE1-202ENST00000396355 RASSF10A6NK89 507 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 N4BP3O15049 544 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 ERFP50548 548 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 TGFB2P61812 414 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 DDX46Q7L014 1031 aaKnown RBP9.32□□□□□ -0.92
NDE1-202ENST00000396355 PNKPQ96T60 521 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 HIP1O00291 1037 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 ANP32DO95626 131 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 ATP5JP18859 108 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 TSGA10IPQ3SY00 556 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 RINLQ6ZS11 566 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 CAPN12Q6ZSI9 719 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 SPATA21Q7Z572 469 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 MRPS27Q92552 414 aaKnown RBP9.32□□□□□ -0.92
NDE1-202ENST00000396355 FAXDC2Q96IV6 333 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 ABCC6O95255 1503 aa9.32□□□□□ -0.92
NDE1-202ENST00000396355 RBM47A0AV96 593 aaKnown RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 OPHN1O60890 802 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 STARD3NLO95772 234 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 TUBBP07437 444 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 PYGBP11216 843 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 DPCR1Q3MIW9 517 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 PREPLQ4J6C6 727 aaPredicted RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 ZC3H12AQ5D1E8 599 aaKnown RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 ARMCX5Q6P1M9 558 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 NBPF15Q8N660 670 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 MGARPQ8TDB4 240 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 DYDC2Q96IM9 177 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 FGD4Q96M96 766 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 SFI1A8K8P3 1242 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 TXNDC9O14530 226 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 SRGAP2O75044 1071 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 IDEP14735 1019 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 GNAT2P19087 354 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 DMPKQ09013 629 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 CCDC96Q2M329 555 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 C16orf87Q6PH81 154 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 ARHGAP18Q8N392 663 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms