RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CCSER1Q9C0I3 900 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 TNMDQ9H2S6 317 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 TFCP2L1Q9NZI6 479 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 ANKIB1Q9P2G1 1089 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 PCDHA4Q9UN74 947 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 ARIH1Q9Y4X5 557 aaPredicted RBP6.08□□□□□ -1.44
VPS41-203ENST00000395969 ZC3H4Q9UPT8 1303 aaKnown RBP6.08□□□□□ -1.44
VPS41-203ENST00000395969 LCTP09848 1927 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 SNAP23O00161 211 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 SPTLC2O15270 562 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 MARCH6O60337 910 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 FECHP22830 423 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 ZNF165P49910 485 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 TRAF1Q13077 416 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 E2F4Q16254 413 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 ZSCAN26Q16670 478 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 DPP8Q6V1X1 898 aaPredicted RBP6.08□□□□□ -1.44
VPS41-203ENST00000395969 FILIP1Q7Z7B0 1213 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 REXO1L1PQ8IX06 675 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 SRBD1Q8N5C6 995 aaKnown RBP6.08□□□□□ -1.44
VPS41-203ENST00000395969 GOLGA5Q8TBA6 731 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 CCDC12Q8WUD4 166 aaPredicted RBP6.08□□□□□ -1.44
VPS41-203ENST00000395969 TEKT1Q969V4 418 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 CCDC85AQ96PX6 553 aaPredicted RBP6.08□□□□□ -1.44
VPS41-203ENST00000395969 PPP2R3BQ9Y5P8 575 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 SPDYE2BA6NHP3 402 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 A6NJR5 290 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 SPDYE6P0CI01 402 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 GUCY2CP25092 1073 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 KRT2P35908 639 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 BAG6P46379 1132 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 MCM6Q14566 821 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 CAMK4Q16566 473 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 SPDYE2Q495Y8 402 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 MFSD14BQ5SR56 506 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 PPP4R3AQ6IN85 833 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 CDC42EP5Q6NZY7 148 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 C2CD5Q86YS7 1000 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 SDR42E1Q8WUS8 393 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 DRC1Q96MC2 740 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 GOLPH3LQ9H4A5 285 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 GPHNQ9NQX3 736 aaPredicted RBP6.08□□□□□ -1.44
VPS41-203ENST00000395969 DACT1Q9NYF0 836 aa6.08□□□□□ -1.44
VPS41-203ENST00000395969 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.08□□□□□ -1.442e-7■■■□□ 15.1
VPS41-203ENST00000395969 PITPNM2Q9BZ72 1349 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 H3BQV1 296 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 LONP1P36776 959 aaKnown RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 IFFO2Q5TF58 517 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 CKAP2LQ8IYA6 745 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 DPF2Q92785 391 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 FAM212AQ96EL1 285 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 NCAPGQ9BPX3 1015 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 MTFR1LQ9H019 292 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 CWC15Q9P013 229 aaKnown RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 ZNF112Q9UJU3 913 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 PSDA5PKW4 1024 aaPredicted RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 ACTN4O43707 911 aaKnown RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 CYP3A4P08684 503 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 PPP1R2P41236 205 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 FXR2P51116 673 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS41-203ENST00000395969 KCNQ4P56696 695 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 STX1AQ16623 288 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 ARHGAP29Q52LW3 1261 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 E4F1Q66K89 784 aaPredicted RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 RSBN1LQ6PCB5 846 aaPredicted RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 SHC4Q6S5L8 630 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 TMCO3Q6UWJ1 677 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 ARHGAP27Q6ZUM4 889 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 BANK1Q8NDB2 785 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 BICD2Q8TD16 824 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 TMEM47Q9BQJ4 181 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 DNAJC25Q9H1X3 360 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 NCOA5Q9HCD5 579 aaKnown RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 ARGLU1Q9NWB6 273 aaPredicted RBP6.07□□□□□ -1.44
VPS41-203ENST00000395969 IMPACTQ9P2X3 320 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 FAM198AQ9UFP1 575 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 IVNS1ABPQ9Y6Y0 642 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 ZSWIM8A7E2V4 1837 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 ARID2Q68CP9 1835 aa6.07□□□□□ -1.44
VPS41-203ENST00000395969 ANKRD65E5RJM6 399 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 CPLX1O14810 134 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TBX3O15119 743 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 SASH3O75995 380 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TBC1D8O95759 1140 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TTLL1O95922 423 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 PDHBP11177 359 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ERCC5P28715 1186 aaPredicted RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 CRKP46108 304 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 HAND2P61296 217 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 GPS2Q13227 327 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 KCNB1Q14721 858 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 EXOC4Q96A65 974 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ZC3H12CQ9C0D7 883 aaKnown RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 MKNK2Q9HBH9 465 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 KIAA1468Q9P260 1216 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 PI4KBQ9UBF8 816 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 RRP15Q9Y3B9 282 aaKnown RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 ABCB11O95342 1321 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 WDR81Q562E7 1941 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 FZD9O00144 591 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 438.6 ms