RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 PLCB2Q00722 1185 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 PDE4BQ07343 736 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 RAB30Q15771 203 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 AKNAD1Q5T1N1 836 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 RASIP1Q5U651 963 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 POTEHQ6S545 545 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 TICAM2Q86XR7 235 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 ZNF444Q8N0Y2 327 aaPredicted RBP8.33□□□□□ -1.08
XCR1-202ENST00000395946 ANKRD35Q8N283 1001 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 CHURC1Q8WUH1 139 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 MYLIPQ8WY64 445 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 GMCL1Q96IK5 515 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 ACAD9Q9H845 621 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 MTMR4Q9NYA4 1195 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 ZHX1Q9UKY1 873 aaPredicted RBP8.33□□□□□ -1.08
XCR1-202ENST00000395946 Q9Y3F1 56 aa8.33□□□□□ -1.08
XCR1-202ENST00000395946 TTC41PQ6P2S7 1318 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 CYP2D7A0A087X1C5 515 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 ARVCFO00192 962 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 ERC2O15083 957 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 GPAA1O43292 621 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 ZEB2O60315 1214 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 EIF5BO60841 1220 aaKnown RBP8.32□□□□□ -1.08
XCR1-202ENST00000395946 ASGR1P07306 291 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 PFKMP08237 780 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
XCR1-202ENST00000395946 BMP3P12645 472 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 TAL1P17542 331 aaPredicted RBP8.32□□□□□ -1.08
XCR1-202ENST00000395946 ITGB8P26012 769 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 TDO2P48775 406 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 NT5C2P49902 561 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
XCR1-202ENST00000395946 KCNA10Q16322 511 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 ARMCX2Q7L311 632 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 FAM126BQ8IXS8 530 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 NEDD1Q8NHV4 660 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 ATXN2LQ8WWM7 1075 aaKnown RBP8.32□□□□□ -1.08
XCR1-202ENST00000395946 TIFAQ96CG3 184 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
XCR1-202ENST00000395946 ZNF576Q9H609 170 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 COG6Q9Y2V7 657 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 UNC80Q8N2C7 3258 aa8.32□□□□□ -1.08
XCR1-202ENST00000395946 MYH7P12883 1935 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 PATL2C9JE40 543 aaKnown RBP8.31□□□□□ -1.08
XCR1-202ENST00000395946 RNF113AO15541 343 aaKnown RBP8.31□□□□□ -1.08
XCR1-202ENST00000395946 RAD21O60216 631 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 PRR29P0C7W0 189 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 TSPY3P0CV98 308 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 TSPY8P0CW00 308 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 EPHB4P54760 987 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 CCDC144BQ3MJ40 725 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 RCSD1Q6JBY9 416 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 FAM133AQ8N9E0 248 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 SLC43A3Q8NBI5 491 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 KIFC2Q96AC6 838 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 CEP95Q96GE4 821 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.08
XCR1-202ENST00000395946 MAF1Q9H063 256 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 KATNBL1Q9H079 304 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 PRDM6Q9NQX0 595 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 CLIP2Q9UDT6 1046 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 RIPK3Q9Y572 518 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 PLXNA1Q9UIW2 1896 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 A0A0C4DFX4 3053 aa8.31□□□□□ -1.08
XCR1-202ENST00000395946 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 CD4P01730 458 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 TNFAIP2Q03169 654 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 GNASQ5JWF2 1037 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 TMEM240Q5SV17 173 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 SLFN13Q68D06 897 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 CCDC144CPQ8IYA2 1237 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 IFNL3Q8IZI9 196 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 CPXCR1Q8N123 301 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 STAG1Q8WVM7 1258 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 HERVK_113Q902F9 699 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 OSBP2Q969R2 916 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 FGD4Q96M96 766 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 NUP88Q99567 741 aaPredicted RBP8.3□□□□□ -1.08
XCR1-202ENST00000395946 DCTPP1Q9H773 170 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 RAVER2Q9HCJ3 691 aaKnown RBP8.3□□□□□ -1.08
XCR1-202ENST00000395946 EPB41L4AQ9HCS5 686 aaPredicted RBP8.3□□□□□ -1.08
XCR1-202ENST00000395946 VTA1Q9NP79 307 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 IL23AQ9NPF7 189 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 MSRAQ9UJ68 235 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 RCAN3Q9UKA8 241 aa8.3□□□□□ -1.08
XCR1-202ENST00000395946 GNEQ9Y223 722 aaKnown RBP8.3□□□□□ -1.08
XCR1-202ENST00000395946 COL11A1P12107 1806 aaPredicted RBP8.3□□□□□ -1.08
XCR1-202ENST00000395946 BAZ2AQ9UIF9 1905 aaKnown RBP8.3□□□□□ -1.08
XCR1-202ENST00000395946 CDH23Q9H251 3354 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 SUPT20HL2P0C7V6 817 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 SLC1A4P43007 532 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 NOVP48745 357 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 GRIN2CQ14957 1233 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 SLFNL1Q499Z3 407 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 IQSEC1Q6DN90 963 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 TLK2Q86UE8 772 aa8.29□□□□□ -1.08
XCR1-202ENST00000395946 RPUSD2Q8IZ73 545 aaKnown RBP8.29□□□□□ -1.08
XCR1-202ENST00000395946 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms