RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 APLFQ8IW19 511 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 CKAP2LQ8IYA6 745 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 MSANTD4Q8NCY6 345 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 CTNNBL1Q8WYA6 563 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 SLC4A9Q96Q91 983 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 LRRCC1Q9C099 1032 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 RABEP2Q9H5N1 569 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 SENP2Q9HC62 589 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 ANO10Q9NW15 660 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 KCPQ6ZWJ8 1503 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 SBF1O95248 1867 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 A6NNZ2 444 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 LRRIQ3A6PVS8 624 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 MYCLP1P12525 358 aaPredicted RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 TRIM21P19474 475 aaKnown RBP9.91□□□□□ -0.82
MSH5-205ENST00000395853 GNAQP50148 359 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 CHMP4BP1P59074 171 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 WHAMMP3Q1A5X7 153 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 TUBB8Q3ZCM7 444 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 FAAH2Q6GMR7 532 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 CCDC70Q6NSX1 233 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 TNS4Q8IZW8 715 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 SMARCC2Q8TAQ2 1214 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 PAGR1Q9BTK6 254 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 NUP58Q9BVL2 599 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 DNAJC25Q9H1X3 360 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 SLC52A2Q9HAB3 445 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 MAP3K2Q9Y2U5 619 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 GRIN2DO15399 1336 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 SALL3Q9BXA9 1300 aa9.91□□□□□ -0.82
MSH5-205ENST00000395853 CNGA1P29973 690 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 GNGT1P63211 74 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 NSUN2Q08J23 767 aaKnown RBP eCLIP9.9□□□□□ -0.82
MSH5-205ENST00000395853 KRT72Q14CN4 511 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 ZNF790Q6PG37 636 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 SSH3Q8TE77 659 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 DYDC1Q8WWB3 177 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 STAMBPL1Q96FJ0 436 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 EHD4Q9H223 541 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 OSBPL3Q9H4L5 887 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 ARHGEF10LQ9HCE6 1279 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 PCDH18Q9HCL0 1135 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 PREBQ9HCU5 417 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 HELLSQ9NRZ9 838 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 RNF181Q9P0P0 153 aa9.9□□□□□ -0.82
MSH5-205ENST00000395853 CTDP1Q9Y5B0 961 aaPredicted RBP9.9□□□□□ -0.82
MSH5-205ENST00000395853 RASSF10A6NK89 507 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 ZNF202O95125 648 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 SMARCA1P28370 1054 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 CDC25CP30307 473 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 CLCN2P51788 898 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 PABPC1LQ4VXU2 614 aaKnown RBP9.9□□□□□ -0.83
MSH5-205ENST00000395853 SMUG1Q53HV7 270 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 BICDL1Q6ZP65 573 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 NANOGNBQ7Z5D8 188 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 TEKT4Q8WW24 435 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 PNKPQ96T60 521 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 RRAGCQ9HB90 399 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 PCMTD2Q9NV79 361 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 WDR35Q9P2L0 1181 aa9.9□□□□□ -0.83
MSH5-205ENST00000395853 MYH14Q7Z406 1995 aaKnown RBP9.9□□□□□ -0.83
MSH5-205ENST00000395853 USP42Q9H9J4 1324 aaKnown RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 AIMP1Q12904 312 aaKnown RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 CBX3Q13185 183 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 PDIA6Q15084 440 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 CRELD2Q6UXH1 353 aaPredicted RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 MAIP1Q8WWC4 291 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 OPTNQ96CV9 577 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 IL1RAPL2Q9NP60 686 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 ATXN10Q9UBB4 475 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 FBXO9Q9UK97 447 aaPredicted RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 GOLGB1Q14789 3259 aaKnown RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 PENKP01210 267 aaPredicted RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 MCM3P25205 808 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 POLA2Q14181 598 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 CWF19L2Q2TBE0 894 aaKnown RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 KSR2Q6VAB6 950 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 ZBTB8BQ8NAP8 495 aaPredicted RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
MSH5-205ENST00000395853 AGBL1Q96MI9 1066 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
MSH5-205ENST00000395853 LRRD1A4D1F6 860 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 SURF6O75683 361 aaKnown RBP9.88□□□□□ -0.83
MSH5-205ENST00000395853 GFPT2O94808 682 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 ANP32DO95626 131 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 ABL1P00519 1130 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 KCNA2P16389 499 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 ALDH3A1P30838 453 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 GUCY1B3Q02153 619 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 PACS1Q6VY07 963 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 SRGAP1Q7Z6B7 1085 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 ZNF496Q96IT1 587 aaPredicted RBP9.88□□□□□ -0.83
MSH5-205ENST00000395853 ZNF570Q96NI8 536 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 LSM1O15116 133 aaKnown RBP9.88□□□□□ -0.83
MSH5-205ENST00000395853 TMCC1O94876 653 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 TM4SF1P30408 202 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 PSMD7P51665 324 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 CABP4P57796 275 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms