RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 RAD9BQ6WBX8 426 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 SEPT12Q8IYM1 358 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 OGFRQ9NZT2 677 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 AKR1B10O60218 316 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 FBXL16Q8N461 479 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 HSD3B7Q9H2F3 369 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 RMND1Q9NWS8 449 aa16.17■□□□□ 0.18
SREBF1-205ENST00000395757 ADAMTSL3P82987 1691 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 GDF11O95390 407 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 KLK7P49862 253 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 PLS1Q14651 629 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 TMEM266Q2M3C6 531 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 UBXN2AP68543 259 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 PRR5LQ6MZQ0 368 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 GSDMAQ96QA5 445 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 BPIFA3Q9BQP9 254 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 RABEP2Q9H5N1 569 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 CTAGE9A4FU28 777 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 CHMP2AO43633 222 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 GTPBP6O43824 516 aaPredicted RBP16.16■□□□□ 0.18
SREBF1-205ENST00000395757 SRGAP2O75044 1071 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 TDP2O95551 362 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 ABL1P00519 1130 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
SREBF1-205ENST00000395757 SYCP1Q15431 976 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
SREBF1-205ENST00000395757 GNA11P29992 359 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 CALCRLQ16602 461 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 CNGA4Q8IV77 575 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-205ENST00000395757 THRAP3Q9Y2W1 955 aaKnown RBP16.15■□□□□ 0.18
SREBF1-205ENST00000395757 PPP2R5BQ15173 497 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 KCTD19Q17RG1 926 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-205ENST00000395757 NCAPH2Q6IBW4 605 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
SREBF1-205ENST00000395757 STX10O60499 249 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 AKR1B1P15121 316 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 CHMP4BP1P59074 171 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 ATP2C1P98194 919 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-205ENST00000395757 CYP4A11Q02928 519 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 TBC1D10BQ4KMP7 808 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-205ENST00000395757 ARFGAP3Q9NP61 516 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
SREBF1-205ENST00000395757 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 TRAF5O00463 557 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 RCSD1Q6JBY9 416 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 USP17L6PQ6QN14 398 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 MAEAQ7L5Y9 396 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 MED15Q96RN5 788 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 DISC1Q9NRI5 854 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 MEIS1O00470 390 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 CYTH3O43739 400 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 KRT79Q5XKE5 535 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 CTIFO43310 598 aaKnown RBP16.14■□□□□ 0.17
SREBF1-205ENST00000395757 ERCC5P28715 1186 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-205ENST00000395757 PMS1P54277 932 aaKnown RBP16.14■□□□□ 0.17
SREBF1-205ENST00000395757 SPA17Q15506 151 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 NEK8Q86SG6 692 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
SREBF1-205ENST00000395757 RASA1P20936 1047 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 IL17AQ16552 155 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 REXO1L1PQ8IX06 675 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 ANKRD7Q92527 254 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 SEPT11Q9NVA2 429 aaKnown RBP16.13■□□□□ 0.17
SREBF1-205ENST00000395757 PCDHA6Q9UN73 950 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 PCDHA8Q9Y5H6 950 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
SREBF1-205ENST00000395757 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 TRIML1Q8N9V2 468 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
SREBF1-205ENST00000395757 HLA-DOAP06340 250 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
SREBF1-205ENST00000395757 SMCR8Q8TEV9 937 aaPredicted RBP16.13■□□□□ 0.17
SREBF1-205ENST00000395757 PPP1R3GB7ZBB8 358 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CXCR5P32302 372 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 SLC1A4P43007 532 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 LMAN1P49257 510 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 SPAG1Q07617 926 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 HSP90B2PQ58FF3 399 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
SREBF1-205ENST00000395757 C2CD5Q86YS7 1000 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 CCDC42Q96M95 316 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 TUBGCP2Q9BSJ2 902 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 VEZTQ9HBM0 779 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 PCDHAC2Q9Y5I4 1007 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 ADCY7P51828 1080 aa16.12■□□□□ 0.17
SREBF1-205ENST00000395757 SHROOM1Q2M3G4 852 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms