RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 ABHD16BQ9H3Z7 469 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 SLC28A3Q9HAS3 691 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 GRIN2DO15399 1336 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 F5H6K3 240 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 NDUFB10O96000 172 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 CCL23P55773 120 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 NKX3-2P78367 333 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 KLRC3Q07444 240 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 CXCL17Q6UXB2 119 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 MICALL1Q8N3F8 863 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 SPC25Q9HBM1 224 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 NCOR1O75376 2440 aa16.21■□□□□ 0.19
CHCHD2-201ENST00000395422 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
CHCHD2-201ENST00000395422 KCNQ1P51787 676 aa16.2■□□□□ 0.18
CHCHD2-201ENST00000395422 WNT8AQ9H1J5 351 aa16.2■□□□□ 0.18
CHCHD2-201ENST00000395422 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
CHCHD2-201ENST00000395422 PAG1Q9NWQ8 432 aa16.2■□□□□ 0.18
CHCHD2-201ENST00000395422 RASA1P20936 1047 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 CNTN2Q02246 1040 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 PPP2R2DQ66LE6 453 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 AMOTL1Q8IY63 956 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 STK11IPQ8N1F8 1099 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 ANKRD35Q8N283 1001 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 CLASRPQ8N2M8 674 aaKnown RBP16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 PRPF38AQ8NAV1 312 aaKnown RBP16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 KIFC2Q96AC6 838 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 NOC4LQ9BVI4 516 aaKnown RBP16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 TRPV6Q9H1D0 765 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 SLC38A10Q9HBR0 1119 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 SLC4A4Q9Y6R1 1079 aa16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 DDX49Q9Y6V7 483 aaKnown RBP16.19■□□□□ 0.18
CHCHD2-201ENST00000395422 RFXAPO00287 272 aa16.18■□□□□ 0.18
CHCHD2-201ENST00000395422 C1QTNF1Q9BXJ1 281 aa16.18■□□□□ 0.18
CHCHD2-201ENST00000395422 PUS7LQ9H0K6 701 aaKnown RBP16.18■□□□□ 0.18
CHCHD2-201ENST00000395422 MTIF3Q9H2K0 278 aaKnown RBP16.18■□□□□ 0.18
CHCHD2-201ENST00000395422 NYAP2Q9P242 653 aa16.18■□□□□ 0.18
CHCHD2-201ENST00000395422 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
CHCHD2-201ENST00000395422 MYO9BQ13459 2157 aa16.18■□□□□ 0.18
CHCHD2-201ENST00000395422 B4GALT4O60513 344 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 ZBED4O75132 1171 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 IFIT2P09913 472 aaKnown RBP16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 TNFAIP2Q03169 654 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 ITGA7Q13683 1181 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 KIF1BPQ96EK5 621 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 SCLYQ96I15 445 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 EPHX3Q9H6B9 360 aa16.17■□□□□ 0.18
CHCHD2-201ENST00000395422 BAZ2AQ9UIF9 1905 aaKnown RBP16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 IGKV6D-41A0A0C4DH26 115 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 SOWAHBA6NEL2 793 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 EPOPA6NHQ4 379 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 PSMC6P62333 389 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 UBE3CQ15386 1083 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 TLK2Q86UE8 772 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 FAM133AQ8N9E0 248 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 CHST13Q8NET6 341 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 HAUS7Q99871 368 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 HOMER2Q9NSB8 354 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 ARPP21Q9UBL0 812 aaPredicted RBP16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 CLIP2Q9UDT6 1046 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 PCDHA11Q9Y5I1 949 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 SLC4A7Q9Y6M7 1214 aa16.16■□□□□ 0.18
CHCHD2-201ENST00000395422 ERC2O15083 957 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 SMPD1P17405 629 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 ATP5JP18859 108 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 TTLL4Q14679 1199 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 SKIV2LQ15477 1246 aaKnown RBP16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 FSCN1Q16658 493 aaKnown RBP16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 KRT40Q6A162 431 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 NOL8Q76FK4 1167 aaKnown RBP16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 DDRGK1Q96HY6 314 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 AGBL1Q96MI9 1066 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 LRFN3Q9BTN0 628 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 A1CFQ9NQ94 594 aaKnown RBP16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 PDGFCQ9NRA1 345 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 MTCH2Q9Y6C9 303 aa16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 GREB1LQ9C091 1923 aaPredicted RBP16.15■□□□□ 0.18
CHCHD2-201ENST00000395422 ZBBXA8MT70 800 aa16.14■□□□□ 0.17
CHCHD2-201ENST00000395422 DYNC1LI2O43237 492 aaPredicted RBP16.14■□□□□ 0.17
CHCHD2-201ENST00000395422 CABYRO75952 493 aa16.14■□□□□ 0.17
CHCHD2-201ENST00000395422 ARHGEF15O94989 841 aa16.14■□□□□ 0.17
CHCHD2-201ENST00000395422 CA3P07451 260 aa16.14■□□□□ 0.17
CHCHD2-201ENST00000395422 ATP2A2P16615 1042 aaKnown RBP16.14■□□□□ 0.17
CHCHD2-201ENST00000395422 OAZ1P54368 228 aa16.14■□□□□ 0.17
CHCHD2-201ENST00000395422 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms