RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TUBB2BQ9BVA1 445 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 SRCAPQ6ZRS2 3230 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 SLC5A1P13866 664 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 ZNF658Q5TYW1 1059 aaPredicted RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 ELOA2Q8IYF1 753 aaPredicted RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 SRBD1Q8N5C6 995 aaKnown RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 TSEN2Q8NCE0 465 aaKnown RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 ITIH6Q6UXX5 1313 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 PSMD14O00487 310 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 GUCY2FP51841 1108 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 APBA1Q02410 837 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 CCDC181Q5TID7 509 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 UIMC1Q96RL1 719 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 ZSCAN10Q96SZ4 725 aaPredicted RBP16■□□□□ 0.15
CLIP2-203ENST00000395060 ABCC12Q96J65 1359 aa16■□□□□ 0.15
CLIP2-203ENST00000395060 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
CLIP2-203ENST00000395060 GYG1P46976 350 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 SPAG1Q07617 926 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 KIF5AQ12840 1032 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 GIGYF2Q6Y7W6 1299 aaKnown RBP15.99■□□□□ 0.15
CLIP2-203ENST00000395060 C2CD5Q86YS7 1000 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 TUBGCP2Q9BSJ2 902 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 MYO1AQ9UBC5 1043 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 RPS6KA5O75582 802 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
CLIP2-203ENST00000395060 CCDC42Q96M95 316 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 MAP3K15Q6ZN16 1313 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 MYO1FO00160 1098 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 NDUFAB1O14561 156 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 CPVLQ9H3G5 476 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 CAPN7Q9Y6W3 813 aa15.99■□□□□ 0.15
CLIP2-203ENST00000395060 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 LGALS16A8MUM7 142 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 FCER1AP12319 257 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 ARID4AP29374 1257 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-203ENST00000395060 CYLC1P35663 651 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-203ENST00000395060 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-203ENST00000395060 DZIP3Q86Y13 1208 aaKnown RBP15.98■□□□□ 0.15
CLIP2-203ENST00000395060 MMRN2Q9H8L6 949 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 ZNF263O14978 683 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 KRT83P78385 493 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 NPY5RQ15761 445 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 RNF187Q5TA31 235 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-203ENST00000395060 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-203ENST00000395060 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
CLIP2-203ENST00000395060 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 BACH1O14867 736 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 SEMA3EO15041 775 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
CLIP2-203ENST00000395060 AARSP49588 968 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLIP2-203ENST00000395060 CKAP4Q07065 602 aaKnown RBP15.97■□□□□ 0.15
CLIP2-203ENST00000395060 SEC23AQ15436 765 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 SPA17Q15506 151 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 ALX1Q15699 326 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 TMTC2Q8N394 836 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 NOC4LQ9BVI4 516 aaKnown RBP15.97■□□□□ 0.15
CLIP2-203ENST00000395060 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 FAM205AQ6ZU69 1335 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 A0A087WUV0 522 aaPredicted RBP15.97■□□□□ 0.15
CLIP2-203ENST00000395060 MAGEB6P1A0A0J9YX57 407 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 LRRC10BA6NIK2 292 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 USP17L12C9JPN9 530 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 USP17L21D6R901 530 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 EPHB6O15197 1021 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 CYP2D6P10635 497 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 GUCY2CP25092 1073 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 UBA7P41226 1012 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 GUCY1A3Q02108 690 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 ARID5AQ03989 594 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 CCDC70Q6NSX1 233 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 IQCA1Q86XH1 822 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 CCDC155Q8N6L0 562 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 INPP5BP32019 993 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 KCNQ4P56696 695 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 TRADDQ15628 312 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 INF2Q27J81 1249 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
CLIP2-203ENST00000395060 IFIH1Q9BYX4 1025 aaKnown RBP15.97■□□□□ 0.15
CLIP2-203ENST00000395060 PACSIN2Q9UNF0 486 aaPredicted RBP15.97■□□□□ 0.15
CLIP2-203ENST00000395060 PKD1L3Q7Z443 1732 aa15.96■□□□□ 0.15
CLIP2-203ENST00000395060 AKR1B10O60218 316 aa15.96■□□□□ 0.15
CLIP2-203ENST00000395060 ATP2C2O75185 946 aa15.96■□□□□ 0.15
CLIP2-203ENST00000395060 HPDP32754 393 aaPredicted RBP15.96■□□□□ 0.15
CLIP2-203ENST00000395060 TRIM14Q14142 442 aa15.96■□□□□ 0.15
CLIP2-203ENST00000395060 PAPD7Q5XG87 772 aaKnown RBP15.96■□□□□ 0.15
CLIP2-203ENST00000395060 CNOT6LQ96LI5 555 aaKnown RBP15.96■□□□□ 0.15
CLIP2-203ENST00000395060 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
CLIP2-203ENST00000395060 EXOC1Q9NV70 894 aa15.96■□□□□ 0.15
CLIP2-203ENST00000395060 CAPN11Q9UMQ6 739 aa15.96■□□□□ 0.15
CLIP2-203ENST00000395060 RASSF10A6NK89 507 aa15.96■□□□□ 0.14
CLIP2-203ENST00000395060 H7C1D1 291 aa15.96■□□□□ 0.14
CLIP2-203ENST00000395060 SEC24CP53992 1094 aa15.96■□□□□ 0.14
CLIP2-203ENST00000395060 FUT2Q10981 343 aa15.96■□□□□ 0.14
CLIP2-203ENST00000395060 TTMPQ5BVD1 217 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms