RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ORC4O43929 436 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 RHOXF2BP0C7M4 288 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 TUBB4BP68371 445 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 HDXQ7Z353 690 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 IRF2BP1Q8IU81 584 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 C4orf32Q8N8J7 132 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 CHP1Q99653 195 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 RHOXF2Q9BQY4 288 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 RMND1Q9NWS8 449 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 ADAM21Q9UKJ8 722 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 L1RE1Q9UN81 338 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 REXO2Q9Y3B8 237 aaKnown RBP20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 SRCAPQ6ZRS2 3230 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 ZBTB22O15209 634 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 MMP10P09238 476 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 AMPD2Q01433 879 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 MCM6Q14566 821 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 CRY2Q49AN0 593 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 NLGN1Q8N2Q7 840 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 SUGCTQ9HAC7 445 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 PDE11AQ9HCR9 933 aa20.65■□□□□ 0.9
PCDHA1-202ENST00000394633 NRXN2Q9P2S2 1712 aa20.64■□□□□ 0.9
PCDHA1-202ENST00000394633 MYH1P12882 1939 aa20.64■□□□□ 0.9
PCDHA1-202ENST00000394633 UTRNP46939 3433 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 CTAGE15A4D2H0 777 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 ERLIN1O75477 346 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 CTAGE8P0CG41 777 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 VSNL1P62760 191 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 UBXN1Q04323 297 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 CTAGE6Q86UF2 777 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 CTAGE4Q8IX94 777 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 FLAD1Q8NFF5 587 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 EXOC4Q96A65 974 aa20.64■□□□□ 0.89
PCDHA1-202ENST00000394633 TULP2O00295 520 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 IRX5P78411 483 aaPredicted RBP20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 ARL6IP4Q66PJ3 421 aaKnown RBP20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 FAM84BQ96KN1 310 aaPredicted RBP20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 PSD3Q9NYI0 1048 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 TRIM49BA6NDI0 452 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 PARP1P09874 1014 aaKnown RBP20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 KLRK1P26718 216 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 LONP1P36776 959 aaKnown RBP20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 CAVIN4Q5BKX8 364 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 MUM1L1Q5H9M0 696 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 MSL3Q8N5Y2 521 aaKnown RBP20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 TRIM10Q9UDY6 481 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 MYO6Q9UM54 1294 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 EPN1Q9Y6I3 576 aaPredicted RBP20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 FAM205AQ6ZU69 1335 aa20.63■□□□□ 0.89
PCDHA1-202ENST00000394633 H7C1D1 291 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 NDUFA10O95299 355 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 BAG6P46379 1132 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 ADSSL1Q8N142 457 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 NOA1Q8NC60 698 aaKnown RBP20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 NSUN4Q96CB9 384 aaKnown RBP20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 DCP1AQ9NPI6 582 aaPredicted RBP20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 TTC26A0AVF1 554 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 CYP2D6P10635 497 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 STAT6P42226 847 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 SF3B2Q13435 895 aaKnown RBP20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 NCAPH2Q6IBW4 605 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 CCDC88AQ3V6T2 1871 aa20.62■□□□□ 0.89
PCDHA1-202ENST00000394633 PMS1P54277 932 aaKnown RBP20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 GRAPQ13588 217 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 WWC2Q6AWC2 1192 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 BLIDQ8IZY5 108 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 MB21D1Q8N884 522 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 GRAPLQ8TC17 118 aaPredicted RBP20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 MECOMQ03112 1051 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 NAALADL2Q58DX5 795 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 RCSD1Q6JBY9 416 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 RPGRQ92834 1020 aaKnown RBP20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 DISC1Q9NRI5 854 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 STK32BQ9NY57 414 aa20.61■□□□□ 0.89
PCDHA1-202ENST00000394633 LGALS16A8MUM7 142 aa20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 N4BP1O75113 896 aaKnown RBP20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 LMAN1P49257 510 aa20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 OR8K1Q8NGG5 319 aa20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 ZBTB9Q96C00 473 aa20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 VPS18Q9P253 973 aa20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 GUCA1BQ9UMX6 200 aa20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 MAST2Q6P0Q8 1798 aa20.6■□□□□ 0.89
PCDHA1-202ENST00000394633 CALML3P27482 149 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 ZSCAN26Q16670 478 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 ZNF507Q8TCN5 953 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 RASGRP4Q8TDF6 673 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 GPKOWQ92917 476 aaPredicted RBP eCLIP20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 TRERF1Q96PN7 1200 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 PP2D1A8MPX8 630 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 EIF3JO75822 258 aaKnown RBP20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 CAPN2P17655 700 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 RAD51AP2Q09MP3 1159 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 CASP8Q14790 479 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 TRAPPC11Q7Z392 1133 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 FBXO33Q7Z6M2 555 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 DNAJC7Q99615 494 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 CRNKL1Q9BZJ0 848 aaKnown RBP20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 GBP3Q9H0R5 595 aa20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 COL11A2P13942 1736 aaPredicted RBP20.59■□□□□ 0.89
PCDHA1-202ENST00000394633 QSER1Q2KHR3 1735 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms