RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
CDH16-202ENST00000394055 TMEM260Q9NX78 707 aa16.6■□□□□ 0.25
CDH16-202ENST00000394055 PDHBP11177 359 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 CDKAL1Q5VV42 579 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 ANKRD7Q92527 254 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 GPCPD1Q9NPB8 672 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 NONOQ15233 471 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDH16-202ENST00000394055 LRRC15Q8TF66 581 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 COA7Q96BR5 231 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 PYM1Q9BRP8 204 aaKnown RBP16.59■□□□□ 0.25
CDH16-202ENST00000394055 C6orf50Q9HD87 102 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 MTMR4Q9NYA4 1195 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 LTBP1Q14766 1721 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 ANKRD31Q8N7Z5 1873 aa16.59■□□□□ 0.25
CDH16-202ENST00000394055 KIF2AO00139 706 aaPredicted RBP16.58■□□□□ 0.25
CDH16-202ENST00000394055 ATP2B2Q01814 1243 aa16.58■□□□□ 0.25
CDH16-202ENST00000394055 NELFBQ8WX92 580 aa16.58■□□□□ 0.25
CDH16-202ENST00000394055 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.25
CDH16-202ENST00000394055 ADD3Q9UEY8 706 aaKnown RBP16.58■□□□□ 0.25
CDH16-202ENST00000394055 DNAI1Q9UI46 699 aa16.58■□□□□ 0.25
CDH16-202ENST00000394055 ARHGAP6O43182 974 aa16.58■□□□□ 0.24
CDH16-202ENST00000394055 MMP10P09238 476 aa16.58■□□□□ 0.24
CDH16-202ENST00000394055 TOGARAM2Q6ZUX3 1019 aa16.58■□□□□ 0.24
CDH16-202ENST00000394055 KRT25Q7Z3Z0 450 aa16.58■□□□□ 0.24
CDH16-202ENST00000394055 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
CDH16-202ENST00000394055 DBNDD1Q9H9R9 158 aa16.58■□□□□ 0.24
CDH16-202ENST00000394055 CGNQ9P2M7 1197 aaKnown RBP16.58■□□□□ 0.24
CDH16-202ENST00000394055 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
CDH16-202ENST00000394055 LRRC37AA6NMS7 1700 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 GABPAQ06546 454 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 PAK1Q13153 545 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 REXO1L1PQ8IX06 675 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 IGSF22Q8N9C0 903 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 TBCKQ8TEA7 893 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 DESI2Q9BSY9 194 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 MPHOSPH10O00566 681 aaKnown RBP16.57■□□□□ 0.24
CDH16-202ENST00000394055 NPR1P16066 1061 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 GNA11P29992 359 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 PRCPP42785 496 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 CACNB3P54284 484 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 MTF1Q14872 753 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 CT47A1Q5JQC4 288 aaPredicted RBP16.57■□□□□ 0.24
CDH16-202ENST00000394055 ZNF658Q5TYW1 1059 aaPredicted RBP16.57■□□□□ 0.24
CDH16-202ENST00000394055 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDH16-202ENST00000394055 PPP2R2CQ9Y2T4 447 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 PCDHAC2Q9Y5I4 1007 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
CDH16-202ENST00000394055 TRIM49BA6NDI0 452 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 RBL2Q08999 1139 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 NFIAQ12857 509 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 NLGN1Q8N2Q7 840 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 VPS16Q9H269 839 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 SERPINB13Q9UIV8 391 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 ETF1P62495 437 aaKnown RBP16.56■□□□□ 0.24
CDH16-202ENST00000394055 KRT31Q15323 416 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 NEK8Q86SG6 692 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 REXO1Q8N1G1 1221 aaKnown RBP16.56■□□□□ 0.24
CDH16-202ENST00000394055 ZFP91Q96JP5 570 aaPredicted RBP16.56■□□□□ 0.24
CDH16-202ENST00000394055 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 TAB2Q9NYJ8 693 aa16.56■□□□□ 0.24
CDH16-202ENST00000394055 FAM196BA6NMK8 535 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 AKR1B15C9JRZ8 316 aaPredicted RBP16.55■□□□□ 0.24
CDH16-202ENST00000394055 APBA3O96018 575 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 PLCG1P19174 1290 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 TECP42680 631 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 FILIP1LQ4L180 1135 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 CABP7Q86V35 215 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 LRRN4CLQ8ND94 238 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 RWDD2AQ9UIY3 292 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 FANCGO15287 622 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 CCP110O43303 1012 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 RAD21O60216 631 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 KMT5BQ4FZB7 885 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 PPFIBP1Q86W92 1011 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 ZFPM1Q8IX07 1006 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 RIOX1Q9H6W3 641 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 SOWAHDA6NJG2 315 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 N4BP3O15049 544 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 STX10O60499 249 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 SLC16A2P36021 539 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 NOVP48745 357 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 TTBK2Q6IQ55 1244 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 KIAA0825Q8IV33 1275 aa16.55■□□□□ 0.24
CDH16-202ENST00000394055 ZSCAN12O43309 604 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 SLU7O95391 586 aaKnown RBP16.54■□□□□ 0.24
CDH16-202ENST00000394055 SHMT1P34896 483 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 TCP10Q12799 353 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 CTAGE1Q96RT6 745 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 CCSER1Q9C0I3 900 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 LAD1O00515 517 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 PBX1P40424 430 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 TXKP42681 527 aa16.54■□□□□ 0.24
CDH16-202ENST00000394055 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms