RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 ATRIPQ8WXE1 791 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 NAPGQ99747 312 aaPredicted RBP16.89■□□□□ 0.29
SHTN1-204ENST00000392903 TTF2Q9UNY4 1162 aaKnown RBP16.89■□□□□ 0.29
SHTN1-204ENST00000392903 LEMD3Q9Y2U8 911 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 SYF2O95926 243 aaKnown RBP16.89■□□□□ 0.29
SHTN1-204ENST00000392903 SARSP49591 514 aaKnown RBP16.89■□□□□ 0.29
SHTN1-204ENST00000392903 MMP14P50281 582 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 MORC3Q14149 939 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 C12orf60Q5U649 245 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 SLC35F6Q8N357 371 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 SLC44A5Q8NCS7 719 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 SAP30BPQ9UHR5 308 aaKnown RBP16.89■□□□□ 0.29
SHTN1-204ENST00000392903 ANKRD65E5RJM6 399 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 NPY5RQ15761 445 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 MCTP2Q6DN12 878 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 PPFIBP1Q86W92 1011 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 TRIML1Q8N9V2 468 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 MED15Q96RN5 788 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 SAMSN1Q9NSI8 373 aaKnown RBP16.88■□□□□ 0.29
SHTN1-204ENST00000392903 MYO1AQ9UBC5 1043 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 AFF2P51816 1311 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 USP17L3A6NCW0 530 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 USP17L4A6NCW7 530 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 UFL1O94874 794 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 FECHP22830 423 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 RBL2Q08999 1139 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 USP17L1Q7RTZ2 530 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 ZNF804AQ7Z570 1209 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 CEP89Q96ST8 783 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
SHTN1-204ENST00000392903 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 PBX1P40424 430 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 PLCD1P51178 756 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 NLRP5P59047 1200 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
SHTN1-204ENST00000392903 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
SHTN1-204ENST00000392903 STAG2Q8N3U4 1231 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 ZNF579Q8NAF0 562 aaKnown RBP16.87■□□□□ 0.29
SHTN1-204ENST00000392903 NOA1Q8NC60 698 aaKnown RBP16.87■□□□□ 0.29
SHTN1-204ENST00000392903 KAT14Q9H8E8 782 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 A0A087X0B3 334 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 SHOX2O60902 331 aaPredicted RBP16.87■□□□□ 0.29
SHTN1-204ENST00000392903 SERPINB2P05120 415 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 SCG2P13521 617 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 GYS1P13807 737 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
SHTN1-204ENST00000392903 PIK3AP1Q6ZUJ8 805 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
SHTN1-204ENST00000392903 LY75O60449 1722 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 MFAP3LO75121 409 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 BAG3O95817 575 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 TFRCP02786 760 aaKnown RBP16.86■□□□□ 0.29
SHTN1-204ENST00000392903 CASP1P29466 404 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 AFMP43652 599 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 AMPD2Q01433 879 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 CCDC51Q96ER9 411 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 TEX33O43247 280 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 ACTN4O43707 911 aaKnown RBP16.86■□□□□ 0.29
SHTN1-204ENST00000392903 PTGDRQ13258 359 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 CCDC91Q7Z6B0 441 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 GPKOWQ92917 476 aaPredicted RBP eCLIP16.86■□□□□ 0.29
SHTN1-204ENST00000392903 PLEKHA4Q9H4M7 779 aa16.86■□□□□ 0.29
SHTN1-204ENST00000392903 SBF2Q86WG5 1849 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 TSPY3P0CV98 308 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 TSPY8P0CW00 308 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 MCM3P25205 808 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 TTC38Q5R3I4 469 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 SYMPKQ92797 1274 aaKnown RBP16.85■□□□□ 0.29
SHTN1-204ENST00000392903 TNFRSF25Q93038 417 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 CD209Q9NNX6 404 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 KIAA1551Q9HCM1 1747 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 DLEC1Q9Y238 1755 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 ZC3H4Q9UPT8 1303 aaKnown RBP16.85■□□□□ 0.29
SHTN1-204ENST00000392903 GSCP56915 257 aaPredicted RBP16.85■□□□□ 0.29
SHTN1-204ENST00000392903 MAP9Q49MG5 647 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 CT47A1Q5JQC4 288 aaPredicted RBP16.85■□□□□ 0.29
SHTN1-204ENST00000392903 CNGA4Q8IV77 575 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 HPCAL4Q9UM19 191 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 MYO6Q9UM54 1294 aa16.85■□□□□ 0.29
SHTN1-204ENST00000392903 LAMB1P07942 1786 aa16.84■□□□□ 0.29
SHTN1-204ENST00000392903 MCM7P33993 719 aa16.84■□□□□ 0.29
SHTN1-204ENST00000392903 GSTO1P78417 241 aa16.84■□□□□ 0.29
SHTN1-204ENST00000392903 PFKFB3Q16875 520 aaPredicted RBP16.84■□□□□ 0.29
SHTN1-204ENST00000392903 ZNF444Q8N0Y2 327 aaPredicted RBP16.84■□□□□ 0.29
SHTN1-204ENST00000392903 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
SHTN1-204ENST00000392903 STAMQ92783 540 aa16.84■□□□□ 0.29
SHTN1-204ENST00000392903 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
SHTN1-204ENST00000392903 KIF5BP33176 963 aa16.84■□□□□ 0.29
SHTN1-204ENST00000392903 SPATA20Q8TB22 786 aa16.84■□□□□ 0.29
SHTN1-204ENST00000392903 ARHGAP25P42331 645 aa16.83■□□□□ 0.28
SHTN1-204ENST00000392903 BTDP43251 543 aa16.83■□□□□ 0.28
SHTN1-204ENST00000392903 USP14P54578 494 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms