RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ATP2B2Q01814 1243 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 TBC1D10BQ4KMP7 808 aaPredicted RBP3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 NBPF12Q5TAG4 269 aaPredicted RBP3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 CRIP3Q6Q6R5 217 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 TTC9BQ8N6N2 239 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 PHC3Q8NDX5 983 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 SH3RF3Q8TEJ3 882 aaPredicted RBP3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 CDADC1Q9BWV3 514 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 SIGLEC6O43699 453 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 F13A1P00488 732 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 DBHP09172 617 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 CDSNQ15517 529 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 MEI1Q5TIA1 1274 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 CCDC84Q86UT8 332 aaPredicted RBP3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 ZNF761Q86XN6 746 aaPredicted RBP3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 DVL3Q92997 716 aaPredicted RBP3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 EAF1Q96JC9 268 aaPredicted RBP3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 SSBP3Q9BWW4 388 aaPredicted RBP3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 AP5S1Q9NUS5 200 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 RNF19AQ9NV58 838 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 ST6GALNAC2Q9UJ37 374 aa3.24□□□□□ -1.89
RNU6-239P-201ENST00000390990 F6X3S4 739 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 MEIS1O00470 390 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 ZNF205O95201 554 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 BPNT1O95861 308 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 PLATP00750 562 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 CYBBP04839 570 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 LDHBP07195 334 aaKnown RBP3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 P4HBP07237 508 aaKnown RBP3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 TGM1P22735 817 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 GNA15P30679 374 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 CTSKP43235 329 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 CHMP4BP1P59074 171 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 RNF4P78317 190 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 PRR5P85299 388 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 PAQR3Q6TCH7 311 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 GATAD2BQ8WXI9 593 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 FRMD6Q96NE9 622 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 NOX5Q96PH1 765 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 CHST7Q9NS84 486 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 SPATA6Q9NWH7 488 aaPredicted RBP3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 FAN1Q9Y2M0 1017 aa3.23□□□□□ -1.89
RNU6-239P-201ENST00000390990 SRGAP3O43295 1099 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 ASGR2P07307 311 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 VAV1P15498 845 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 POLR2BP30876 1174 aaKnown RBP3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 BMP8BP34820 402 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 SARSP49591 514 aaKnown RBP3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 CAMK2GQ13555 558 aaPredicted RBP3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 ARSHQ5FYA8 562 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 LIMS2Q7Z4I7 341 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 B3GNT8Q7Z7M8 397 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 ZSCAN29Q8IWY8 852 aaPredicted RBP3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 CHST13Q8NET6 341 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 ZNF512BQ96KM6 892 aaPredicted RBP3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 ASB16Q96NS5 453 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 ZNF747Q9BV97 191 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 RNF38Q9H0F5 515 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 PCED1AQ9H1Q7 454 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 BCAS3Q9H6U6 928 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 AK5Q9Y6K8 562 aa3.22□□□□□ -1.89
RNU6-239P-201ENST00000390990 F8W031 263 aaPredicted RBP3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 FZD7O75084 574 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 PF4P02776 101 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 NCAM1P13591 858 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 KLF10Q13118 480 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 RTP2Q5QGT7 225 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 BICRALQ6AI39 1079 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 GFOD1Q9NXC2 390 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 ING1Q9UK53 422 aaPredicted RBP3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 TSC22D4Q9Y3Q8 395 aa3.21□□□□□ -1.9
RNU6-239P-201ENST00000390990 A0A1W2PQ27 194 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 A0A1W2PQ64 194 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 A0A1W2PQC6 194 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 A0A1W2PQD8 194 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 AMHP03971 560 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 RLBP1P12271 317 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 RAG1P15918 1043 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 ENDOUP21128 410 aaKnown RBP3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 LMNB2Q03252 620 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 CRTC3Q6UUV7 619 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 ADAMTS17Q8TE56 1095 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 VPS11Q9H270 941 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 NTMQ9P121 344 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 GNEQ9Y223 722 aaKnown RBP3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 INVSQ9Y283 1065 aa3.2□□□□□ -1.9
RNU6-239P-201ENST00000390990 TACR1P25103 407 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 PMLP29590 882 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 DIEXFQ68CQ4 756 aaKnown RBP3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 REC114Q7Z4M0 266 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 FBXO27Q8NI29 283 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 SMARCC2Q8TAQ2 1214 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 ALG3Q92685 438 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 KISS1RQ969F8 398 aaPredicted RBP3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 NOC4LQ9BVI4 516 aaKnown RBP3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 ANTXR1Q9H6X2 564 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 RXFP1Q9HBX9 757 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 PDLIM7Q9NR12 457 aa3.19□□□□□ -1.9
RNU6-239P-201ENST00000390990 HS3ST3A1Q9Y663 406 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms