RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 FAM43AQ8N2R8 423 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 SDR16C5Q8N3Y7 309 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 FAXDC2Q96IV6 333 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 RSPH9Q9H1X1 276 aaPredicted RBP7.81□□□□□ -1.16
TRAV35-201ENST00000390462 SAGE1Q9NXZ1 904 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 HDAC9Q9UKV0 1011 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 PTPN22Q9Y2R2 807 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 FKBP9O95302 570 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 IL33O95760 270 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 NEFMP07197 916 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 HSPA6P17066 643 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 ADCYAP1R1P41586 468 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 USP14P54578 494 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 GPSM2P81274 684 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 CCDC96Q2M329 555 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 RGL3Q3MIN7 710 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 WIPI1Q5MNZ9 446 aaPredicted RBP7.8□□□□□ -1.16
TRAV35-201ENST00000390462 FKBP9P1Q75LS8 142 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 PDZD3Q86UT5 571 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 C1orf162Q8NEQ5 155 aaPredicted RBP7.8□□□□□ -1.16
TRAV35-201ENST00000390462 AHCYL2Q96HN2 611 aaKnown RBP7.8□□□□□ -1.16
TRAV35-201ENST00000390462 NSUN5Q96P11 429 aaKnown RBP7.8□□□□□ -1.16
TRAV35-201ENST00000390462 LGR6Q9HBX8 967 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 POLMQ9NP87 494 aaPredicted RBP7.8□□□□□ -1.16
TRAV35-201ENST00000390462 NMRK2Q9NPI5 230 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 PCDHGB3Q9Y5G1 929 aa7.8□□□□□ -1.16
TRAV35-201ENST00000390462 CLASP1Q7Z460 1538 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 RHOBTB3O94955 611 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 AGR2O95994 175 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 EPHX1P07099 455 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 RBP3P10745 1247 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 ZKSCAN1P17029 563 aaPredicted RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 RHCEP18577 417 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 NFKB1P19838 968 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 TNFAIP3P21580 790 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 GRIK1P39086 918 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 CTSOP43234 321 aaPredicted RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 PMS1P54277 932 aaKnown RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 KRT85P78386 507 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 RHDQ02161 417 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 SFSWAPQ12872 951 aaKnown RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 TBX2Q13207 712 aaPredicted RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 ODF1Q14990 250 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 LONRF1Q17RB8 773 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 ATP13A4Q4VNC1 1196 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 MAP1SQ66K74 1059 aaPredicted RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 ZCCHC8Q6NZY4 707 aaKnown RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 CC2D1AQ6P1N0 951 aaPredicted RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 MAATS1Q7Z4T9 603 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 CATIPQ7Z7H3 387 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 MYLK4Q86YV6 388 aaPredicted RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 BSNDQ8WZ55 320 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 PTPRN2Q92932 1015 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 DHRS1Q96LJ7 313 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 TBATAQ96M53 351 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 PBX4Q9BYU1 374 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 RASSF4Q9H2L5 321 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 VTA1Q9NP79 307 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 TRMT13Q9NUP7 481 aaKnown RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 NOL7Q9UMY1 257 aaKnown RBP7.79□□□□□ -1.16
TRAV35-201ENST00000390462 SNCAIPQ9Y6H5 919 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 KAT6BQ8WYB5 2073 aa7.79□□□□□ -1.16
TRAV35-201ENST00000390462 ZNF891A8MT65 544 aaPredicted RBP7.78□□□□□ -1.16
TRAV35-201ENST00000390462 CAPN5O15484 640 aaPredicted RBP7.78□□□□□ -1.16
TRAV35-201ENST00000390462 CTNND1O60716 968 aaKnown RBP7.78□□□□□ -1.16
TRAV35-201ENST00000390462 UPP2O95045 317 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 CFBP00751 764 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 RAG1P15918 1043 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 RRM1P23921 792 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 TOMM20Q15388 145 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 TMEM201Q5SNT2 666 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 PGM2L1Q6PCE3 622 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 IGF2-ASQ6U949 168 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 B3GNT9Q6UX72 402 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 PRICKLE2Q7Z3G6 844 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 NXPE1Q8N323 547 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 SMC1BQ8NDV3 1235 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 SLC35G2Q8TBE7 412 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 LGR4Q9BXB1 951 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 CRISPLD1Q9H336 500 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 TIMMDC1Q9NPL8 285 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 FAM86C1Q9NVL1 165 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 CACNA2D2Q9NY47 1150 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 APEX2Q9UBZ4 518 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 KLHL3Q9UH77 587 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 PCDHA4Q9UN74 947 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 DNM3Q9UQ16 869 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
TRAV35-201ENST00000390462 C9IYK1 514 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 HIP1RO75146 1068 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 ULK1O75385 1050 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 TP53P04637 393 aaPredicted RBP7.77□□□□□ -1.17
TRAV35-201ENST00000390462 SLC5A1P13866 664 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 CALRP27797 417 aaKnown RBP7.77□□□□□ -1.17
TRAV35-201ENST00000390462 TRIM14Q14142 442 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 CFAP161Q6P656 301 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 LDHAL6AQ6ZMR3 332 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 PPFIBP1Q86W92 1011 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 ZNF513Q8N8E2 541 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms