RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 KIFC2Q96AC6 838 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 ZBED2Q9BTP6 218 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 NOC4LQ9BVI4 516 aaKnown RBP11.71□□□□□ -0.53
TRAV18-201ENST00000390446 SEZ6LQ9BYH1 1024 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 RAVER2Q9HCJ3 691 aaKnown RBP11.71□□□□□ -0.53
TRAV18-201ENST00000390446 HOMER2Q9NSB8 354 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 FBXO40Q9UH90 709 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 SPTBN5Q9NRC6 3674 aaKnown RBP11.71□□□□□ -0.54
TRAV18-201ENST00000390446 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 MYO9BQ13459 2157 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 A0A0G2JMZ2 1700 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 PRR33A8MZF0 331 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 B4GALT4O60513 344 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 PFKMP08237 780 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 SUPT20HL2P0C7V6 817 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 PDE6AP16499 860 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 PSMC6P62333 389 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 ATP8B2P98198 1209 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 TTLL4Q14679 1199 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 TLK2Q86UE8 772 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAV18-201ENST00000390446 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
TRAV18-201ENST00000390446 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
TRAV18-201ENST00000390446 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
TRAV18-201ENST00000390446 ARMT1Q9H993 441 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 RIPK3Q9Y572 518 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 PRUNE2Q8WUY3 3088 aa11.7□□□□□ -0.54
TRAV18-201ENST00000390446 ADCY6O43306 1168 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 ALADP13716 330 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 POU3F3P20264 500 aaPredicted RBP11.69□□□□□ -0.54
TRAV18-201ENST00000390446 KCNJ6P48051 423 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 RARSP54136 660 aaKnown RBP11.69□□□□□ -0.54
TRAV18-201ENST00000390446 POLA2Q14181 598 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 FAM47CQ5HY64 1035 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 SLC9A7Q96T83 725 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 WNT8AQ9H1J5 351 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 C11orf16Q9NQ32 467 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
TRAV18-201ENST00000390446 ATP8A2Q9NTI2 1148 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 MYO5AQ9Y4I1 1855 aaKnown RBP11.69□□□□□ -0.54
TRAV18-201ENST00000390446 DNAH12Q6ZR08 3092 aa11.69□□□□□ -0.54
TRAV18-201ENST00000390446 DNAJC25-GNG10A0A024R161 153 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 CYP2D7A0A087X1C5 515 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.68□□□□□ -0.54
TRAV18-201ENST00000390446 ASB14A6NK59 587 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 USP17L21D6R901 530 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 GOLIM4O00461 696 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 PRKAB2O43741 272 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 CYP2C9P11712 490 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
TRAV18-201ENST00000390446 GRB10Q13322 594 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 EEPD1Q7L9B9 569 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 GJD3Q8N144 294 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 REPS2Q8NFH8 660 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 SNX27Q96L92 541 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 C1orf115Q9H7X2 142 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 MKNK2Q9HBH9 465 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 COG6Q9Y2V7 657 aa11.68□□□□□ -0.54
TRAV18-201ENST00000390446 EPOPA6NHQ4 379 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 MBD4O95243 580 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 MYL3P08590 195 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 TRIM27P14373 513 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 CNTN2Q02246 1040 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 TAP1Q03518 808 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 C12orf60Q5U649 245 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 HERC6Q8IVU3 1022 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 PHOSPHO2Q8TCD6 241 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 ALDH8A1Q9H2A2 487 aaPredicted RBP11.67□□□□□ -0.54
TRAV18-201ENST00000390446 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 MTUS1Q9ULD2 1270 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 GBF1Q92538 1859 aa11.67□□□□□ -0.54
TRAV18-201ENST00000390446 COL11A1P12107 1806 aaPredicted RBP11.67□□□□□ -0.54
TRAV18-201ENST00000390446 LAMA2P24043 3122 aaKnown RBP11.66□□□□□ -0.54
TRAV18-201ENST00000390446 ZNF536O15090 1300 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 NAV1Q8NEY1 1877 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 F5H6K3 240 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 CTAGE5O15320 804 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 KLRC3Q07444 240 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 IQSEC1Q6DN90 963 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 EP400NLQ6ZTU2 488 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 KIAA1211Q6ZU35 1233 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 C16orf86Q6ZW13 317 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 ERC1Q8IUD2 1116 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 AGBL1Q96MI9 1066 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAV18-201ENST00000390446 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 CD320Q9NPF0 282 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 TRMT13Q9NUP7 481 aaKnown RBP11.66□□□□□ -0.54
TRAV18-201ENST00000390446 TNNQ9UQP3 1299 aa11.66□□□□□ -0.54
TRAV18-201ENST00000390446 SLC4A4Q9Y6R1 1079 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms