RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 KLC4Q9NSK0 619 aa13.52□□□□□ -0.25
SHOX-203ENST00000381578 MEFVO15553 781 aaPredicted RBP13.52□□□□□ -0.25
SHOX-203ENST00000381578 FTCDO95954 541 aa13.52□□□□□ -0.25
SHOX-203ENST00000381578 IFIT1BQ5T764 474 aaKnown RBP13.52□□□□□ -0.25
SHOX-203ENST00000381578 BICDL1Q6ZP65 573 aa13.52□□□□□ -0.25
SHOX-203ENST00000381578 SEC31BQ9NQW1 1179 aa13.52□□□□□ -0.25
SHOX-203ENST00000381578 GCOM1H8Y6P7 765 aaPredicted RBP13.51□□□□□ -0.25
SHOX-203ENST00000381578 TOM1O60784 492 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 TCP11X2Q5H9J9 407 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 MS4A14Q96JA4 679 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 UBXN6Q9BZV1 441 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 LACRTQ9GZZ8 138 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 LUC7LQ9NQ29 371 aaKnown RBP13.51□□□□□ -0.25
SHOX-203ENST00000381578 SNAP23O00161 211 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 PRKAB2O43741 272 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 ELF1P32519 619 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 PAK2Q13177 524 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 KRT71Q3SY84 523 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 ARFGAP2Q8N6H7 521 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 FBXO2Q9UK22 296 aaPredicted RBP13.51□□□□□ -0.25
SHOX-203ENST00000381578 STK38LQ9Y2H1 464 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 CTNNA1P35221 906 aaKnown RBP13.51□□□□□ -0.25
SHOX-203ENST00000381578 EPHB4P54760 987 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 EHHADHQ08426 723 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 PDE4DQ08499 809 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 GSDMAQ96QA5 445 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 KRT23Q9C075 422 aa13.51□□□□□ -0.25
SHOX-203ENST00000381578 SRPRBQ9Y5M8 271 aaKnown RBP13.51□□□□□ -0.25
SHOX-203ENST00000381578 CPDO75976 1380 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 RNF225M0QZC1 329 aaPredicted RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 ZNF18P17022 549 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 ADAT2Q7Z6V5 191 aaKnown RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 TRIM58Q8NG06 486 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 TUBGCP2Q9BSJ2 902 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 MEGF6O75095 1541 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 RPN1P04843 607 aaKnown RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 KLK7P49862 253 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 ZNF654Q8IZM8 581 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 CACNA2D3Q8IZS8 1091 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 VAT1LQ9HCJ6 419 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 HAUS2Q9NVX0 235 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 PACSIN2Q9UNF0 486 aaPredicted RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 CEP104O60308 925 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 HDLBPQ00341 1268 aaKnown RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 BIRC2Q13490 618 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 CFAP221Q4G0U5 840 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 FANCBQ8NB91 859 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 OR2W6PQ8NHA6 318 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 RASGRP4Q8TDF6 673 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 RNPC3Q96LT9 517 aaKnown RBP13.5□□□□□ -0.25
SHOX-203ENST00000381578 HYOU1Q9Y4L1 999 aa13.5□□□□□ -0.25
SHOX-203ENST00000381578 NEDD4P46934 1319 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 IFNAR2P48551 515 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 STIM2Q9P246 746 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 SPATA4Q8NEY3 305 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 TRMT112Q9UI30 125 aaKnown RBP13.49□□□□□ -0.25
SHOX-203ENST00000381578 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
SHOX-203ENST00000381578 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 PDHBP11177 359 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 PRCPP42785 496 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 ZIM3Q96PE6 472 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 CCT8L2Q96SF2 557 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 VIPAS39Q9H9C1 493 aa13.49□□□□□ -0.25
SHOX-203ENST00000381578 ZSCAN5CA6NGD5 496 aaPredicted RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 PAX7P23759 505 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 LSP1P33241 339 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 FAM133BQ5BKY9 247 aaKnown RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 NAA35Q5VZE5 725 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 TRIM68Q6AZZ1 485 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 WDR93Q6P2C0 686 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 SUGP1Q8IWZ8 645 aaKnown RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 MAP3K14Q99558 947 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 PDE2AO00408 941 aaPredicted RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 CARSP49589 748 aaKnown RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 RAPGEF1Q13905 1077 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 DYMQ7RTS9 669 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 NLRP14Q86W24 1093 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 MB21D1Q8N884 522 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 ZNF473Q8WTR7 871 aaKnown RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 SDR42E1Q8WUS8 393 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 CNNM2Q9H8M5 875 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 TCP11L1Q9NUJ3 509 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 GGT7Q9UJ14 662 aa13.48□□□□□ -0.25
SHOX-203ENST00000381578 FMNL1O95466 1100 aaPredicted RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 KRT18P05783 430 aaKnown RBP13.48□□□□□ -0.25
SHOX-203ENST00000381578 PDE6AP16499 860 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms