RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 STAT3P40763 770 aa17.96■□□□□ 0.47
PDGFB-202ENST00000381551 SCRN1Q12765 414 aa17.96■□□□□ 0.47
PDGFB-202ENST00000381551 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
PDGFB-202ENST00000381551 ZSCAN31Q96LW9 406 aaPredicted RBP17.96■□□□□ 0.47
PDGFB-202ENST00000381551 PIGSQ96S52 555 aa17.96■□□□□ 0.47
PDGFB-202ENST00000381551 SPATC1LQ9H0A9 340 aa17.96■□□□□ 0.47
PDGFB-202ENST00000381551 CTDP1Q9Y5B0 961 aaPredicted RBP17.96■□□□□ 0.47
PDGFB-202ENST00000381551 MCM2P49736 904 aa17.95■□□□□ 0.46
PDGFB-202ENST00000381551 SP3Q02447 781 aa17.95■□□□□ 0.46
PDGFB-202ENST00000381551 COL13A1Q5TAT6 717 aaPredicted RBP17.95■□□□□ 0.46
PDGFB-202ENST00000381551 CCDC174Q6PII3 467 aa17.95■□□□□ 0.46
PDGFB-202ENST00000381551 NECAB1Q8N987 351 aa17.95■□□□□ 0.46
PDGFB-202ENST00000381551 AGBL1Q96MI9 1066 aa17.95■□□□□ 0.46
PDGFB-202ENST00000381551 MOV10L1Q9BXT6 1211 aaKnown RBP17.95■□□□□ 0.46
PDGFB-202ENST00000381551 RAVER2Q9HCJ3 691 aaKnown RBP17.95■□□□□ 0.46
PDGFB-202ENST00000381551 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
PDGFB-202ENST00000381551 ZBTB5O15062 677 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 FOXN1O15353 648 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 ICAM1P05362 532 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 HSPA1AP0DMV8 641 aaKnown RBP17.94■□□□□ 0.46
PDGFB-202ENST00000381551 HSPA1BP0DMV9 641 aaKnown RBP17.94■□□□□ 0.46
PDGFB-202ENST00000381551 PLS1Q14651 629 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 CDC37Q16543 378 aaPredicted RBP17.94■□□□□ 0.46
PDGFB-202ENST00000381551 QRICH1Q2TAL8 776 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 RIOX2Q8IUF8 465 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 GTF3C6Q969F1 213 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 RIPK3Q9Y572 518 aa17.94■□□□□ 0.46
PDGFB-202ENST00000381551 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
PDGFB-202ENST00000381551 A0A0G2JMZ2 1700 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 PNMA6FA0A0J9YX94 578 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 IFNAR1P17181 557 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 CCNA1P78396 465 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 SNRNP48Q6IEG0 339 aaKnown RBP17.93■□□□□ 0.46
PDGFB-202ENST00000381551 HOMER1Q86YM7 354 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 TNS4Q8IZW8 715 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 ZNF296Q8WUU4 475 aaPredicted RBP17.93■□□□□ 0.46
PDGFB-202ENST00000381551 RRP36Q96EU6 259 aaKnown RBP17.93■□□□□ 0.46
PDGFB-202ENST00000381551 PORCNQ9H237 461 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 SH2B1Q9NRF2 756 aaPredicted RBP17.93■□□□□ 0.46
PDGFB-202ENST00000381551 PNMA2Q9UL42 364 aa17.93■□□□□ 0.46
PDGFB-202ENST00000381551 COL11A1P12107 1806 aaPredicted RBP17.93■□□□□ 0.46
PDGFB-202ENST00000381551 CPLX1O14810 134 aa17.92■□□□□ 0.46
PDGFB-202ENST00000381551 PRPF3O43395 683 aaKnown RBP17.92■□□□□ 0.46
PDGFB-202ENST00000381551 PPP1R11O60927 126 aaPredicted RBP17.92■□□□□ 0.46
PDGFB-202ENST00000381551 FKTNO75072 461 aa17.92■□□□□ 0.46
PDGFB-202ENST00000381551 SLC25A27O95847 323 aa17.92■□□□□ 0.46
PDGFB-202ENST00000381551 LACTBP83111 547 aaPredicted RBP17.92■□□□□ 0.46
PDGFB-202ENST00000381551 SHCBP1Q8NEM2 672 aa17.92■□□□□ 0.46
PDGFB-202ENST00000381551 PIBF1Q8WXW3 757 aa17.92■□□□□ 0.46
PDGFB-202ENST00000381551 EFCC1Q9HA90 598 aa17.92■□□□□ 0.46
PDGFB-202ENST00000381551 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
PDGFB-202ENST00000381551 hCG_1642624A0A1W2PR95 340 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 CTDNEP1O95476 244 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 HSPA8P11142 646 aaKnown RBP17.91■□□□□ 0.46
PDGFB-202ENST00000381551 ERCC3P19447 782 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 CTGFP29279 349 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 SLC4A3P48751 1232 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 CPLX2Q6PUV4 134 aaKnown RBP17.91■□□□□ 0.46
PDGFB-202ENST00000381551 FBXO11Q86XK2 927 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 PHKBQ93100 1093 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 SNX21Q969T3 373 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 TMX3Q96JJ7 454 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 AMNQ9BXJ7 453 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 MROH8Q9H579 483 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 CCPG1Q9ULG6 757 aa17.91■□□□□ 0.46
PDGFB-202ENST00000381551 PPFIA3O75145 1194 aa17.9■□□□□ 0.46
PDGFB-202ENST00000381551 ALAS1P13196 640 aa17.9■□□□□ 0.46
PDGFB-202ENST00000381551 MAPK4P31152 587 aa17.9■□□□□ 0.46
PDGFB-202ENST00000381551 CTCFP49711 727 aaPredicted RBP17.9■□□□□ 0.46
PDGFB-202ENST00000381551 CAP1Q01518 475 aa17.9■□□□□ 0.46
PDGFB-202ENST00000381551 TKFCQ3LXA3 575 aa17.9■□□□□ 0.46
PDGFB-202ENST00000381551 NCAPG2Q86XI2 1143 aa17.9■□□□□ 0.46
PDGFB-202ENST00000381551 CCAR1Q8IX12 1150 aaKnown RBP17.9■□□□□ 0.46
PDGFB-202ENST00000381551 TRERF1Q96PN7 1200 aa17.9■□□□□ 0.46
PDGFB-202ENST00000381551 RNF26Q9BY78 433 aaPredicted RBP17.9■□□□□ 0.46
PDGFB-202ENST00000381551 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
PDGFB-202ENST00000381551 SMCHD1A6NHR9 2005 aa17.89■□□□□ 0.46
PDGFB-202ENST00000381551 CDKL5O76039 1030 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 FMNL1O95466 1100 aaPredicted RBP17.89■□□□□ 0.45
PDGFB-202ENST00000381551 TAL1P17542 331 aaPredicted RBP17.89■□□□□ 0.45
PDGFB-202ENST00000381551 COPB2P35606 906 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 PSMC4P43686 418 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 LBX1P52954 281 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 SSRP1Q08945 709 aaKnown RBP17.89■□□□□ 0.45
PDGFB-202ENST00000381551 PKN1Q16512 942 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 USH1GQ495M9 461 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 CHST13Q8NET6 341 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 SLC26A6Q9BXS9 759 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 ARHGAP39Q9C0H5 1083 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
PDGFB-202ENST00000381551 PCDHA1Q9Y5I3 950 aa17.89■□□□□ 0.45
PDGFB-202ENST00000381551 DTNBO60941 627 aa17.88■□□□□ 0.45
PDGFB-202ENST00000381551 ECM2O94769 699 aaPredicted RBP17.88■□□□□ 0.45
PDGFB-202ENST00000381551 FCGRTP55899 365 aa17.88■□□□□ 0.45
PDGFB-202ENST00000381551 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
PDGFB-202ENST00000381551 TRAF1Q13077 416 aa17.88■□□□□ 0.45
PDGFB-202ENST00000381551 KIF22Q14807 665 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms