RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
NKX3-1-201ENST00000380871 WDR66Q8TBY9 1149 aa18.3■□□□□ 0.52
NKX3-1-201ENST00000380871 NAPGQ99747 312 aaPredicted RBP18.3■□□□□ 0.52
NKX3-1-201ENST00000380871 MTA3Q9BTC8 594 aa18.3■□□□□ 0.52
NKX3-1-201ENST00000380871 ARPP21Q9UBL0 812 aaPredicted RBP18.3■□□□□ 0.52
NKX3-1-201ENST00000380871 NRAPQ86VF7 1730 aa18.3■□□□□ 0.52
NKX3-1-201ENST00000380871 BTDP43251 543 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 UBXN1Q04323 297 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 TXLNBQ8N3L3 684 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 IL17RBQ9NRM6 502 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 RBM28Q9NW13 759 aaKnown RBP18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 TTF2Q9UNY4 1162 aaKnown RBP18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 RAD21O60216 631 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 BAG3O95817 575 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 SCG2P13521 617 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 MSANTD4Q8NCY6 345 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 ITIH6Q6UXX5 1313 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 FAM205AQ6ZU69 1335 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 CALM1P0DP23 149 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 CALM2P0DP24 149 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 CALM3P0DP25 149 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 FECHP22830 423 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 ZSCAN26Q16670 478 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 MFSD14BQ5SR56 506 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 RCSD1Q6JBY9 416 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 IRF2BP1Q8IU81 584 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 RWDD2AQ9UIY3 292 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 RAB21Q9UL25 225 aa18.29■□□□□ 0.52
NKX3-1-201ENST00000380871 TMTC1Q8IUR5 882 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 MXD3Q9BW11 206 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 CD209Q9NNX6 404 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 L1RE1Q9UN81 338 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 TTC26A0AVF1 554 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 TULP2O00295 520 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 RPN1P04843 607 aaKnown RBP18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 GTF2IP78347 998 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 CYP26C1Q6V0L0 522 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 FAN1Q9Y2M0 1017 aa18.28■□□□□ 0.52
NKX3-1-201ENST00000380871 LCMT1Q9UIC8 334 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 GGA1Q9UJY5 639 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 CTAGE15A4D2H0 777 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 LRRC10BA6NIK2 292 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 CTAGE8P0CG41 777 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 CT47A1Q5JQC4 288 aaPredicted RBP18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 CTAGE6Q86UF2 777 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 CTAGE4Q8IX94 777 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 CACNA1SQ13698 1873 aa18.27■□□□□ 0.52
NKX3-1-201ENST00000380871 GTPBP6O43824 516 aaPredicted RBP18.27■□□□□ 0.51
NKX3-1-201ENST00000380871 DDAH1O94760 285 aa18.27■□□□□ 0.51
NKX3-1-201ENST00000380871 SLURP2P0DP57 97 aa18.27■□□□□ 0.51
NKX3-1-201ENST00000380871 GYS1P13807 737 aa18.27■□□□□ 0.51
NKX3-1-201ENST00000380871 HDXQ7Z353 690 aa18.27■□□□□ 0.51
NKX3-1-201ENST00000380871 CCDC51Q96ER9 411 aa18.27■□□□□ 0.51
NKX3-1-201ENST00000380871 LEMD3Q9Y2U8 911 aa18.27■□□□□ 0.51
NKX3-1-201ENST00000380871 ORC4O43929 436 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 HSPA1LP34931 641 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 AMPD2Q01433 879 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 ATP2B2Q01814 1243 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 HNRNPLLQ8WVV9 542 aaKnown RBP18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 MYH13Q9UKX3 1938 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 BMP15O95972 392 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 KIF5BP33176 963 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 GPS2Q13227 327 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 ZNF658Q5TYW1 1059 aaPredicted RBP18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 QTRT2Q9H974 415 aaKnown RBP18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 MYO6Q9UM54 1294 aa18.26■□□□□ 0.51
NKX3-1-201ENST00000380871 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 NDUFA10O95299 355 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 PARP1P09874 1014 aaKnown RBP18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 CASP8Q14790 479 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 DOK7Q18PE1 504 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 LRRC15Q8TF66 581 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 GDAP1L1Q96MZ0 367 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 STAT6P42226 847 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 KLK7P49862 253 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 TYW1BQ6NUM6 668 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 USP17L2Q6R6M4 530 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 UBA5Q9GZZ9 404 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 EPN1Q9Y6I3 576 aaPredicted RBP18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 WNK3Q9BYP7 1800 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 NAALADL2Q58DX5 795 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 HINFPQ9BQA5 517 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
NKX3-1-201ENST00000380871 VGLL3A8MV65 326 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 G3V3G9 751 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 NKRFO15226 690 aaKnown RBP eCLIP18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 ZMYND10O75800 440 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 SCNN1DP51172 638 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 DCAF8Q5TAQ9 597 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 CCDC102AQ96A19 550 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 EXOC4Q96A65 974 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 CAPZA3Q96KX2 299 aa18.24■□□□□ 0.51
NKX3-1-201ENST00000380871 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms