RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 CTNNA1P35221 906 aaKnown RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 B4GALNT2Q8NHY0 566 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 PIP4K2CQ8TBX8 421 aa11.79□□□□□ -0.52
CLCN4-202ENST00000380833 TUBA8Q9NY65 449 aaPredicted RBP11.79□□□□□ -0.52
CLCN4-202ENST00000380833 ARHGEF35A5YM69 484 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 ZBED4O75132 1171 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 EPB41P11171 864 aaKnown RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 YARSP54577 528 aaKnown RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 PPP1R14BQ96C90 147 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 OMA1Q96E52 524 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 ANKRD36BQ8N2N9 1353 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 VCAM1P19320 739 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 BMP2KLQ5H9B9 411 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 SEL1L2Q5TEA6 688 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 OPTNQ96CV9 577 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 TRAIPQ9BWF2 469 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 NPHP3Q7Z494 1330 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 NOS1P29475 1434 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 CLCN6P51797 869 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 SMTNP53814 917 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 TTC22Q5TAA0 569 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 CMTR1Q8N1G2 835 aaKnown RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 MYCT1Q8N699 235 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 SCHIP1Q9P0W5 487 aaPredicted RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 PTPRCP08575 1304 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 GIPC1O14908 333 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 SASH1O94885 1247 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 HIBADHP31937 336 aaKnown RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 GNAQP50148 359 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 ARHGAP44Q17R89 818 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 STAMQ92783 540 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 DNAJC6O75061 913 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 TNFAIP3P21580 790 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 TRIM14Q14142 442 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 SUGCTQ9HAC7 445 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 MLXIPQ9HAP2 919 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 CSADQ9Y600 493 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 H7C1D1 291 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 ITIH3Q06033 890 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 GLE1Q53GS7 698 aaKnown RBP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 TMTC4Q5T4D3 741 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 FAM102BQ5T8I3 360 aa11.78□□□□□ -0.52
CLCN4-202ENST00000380833 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLCN4-202ENST00000380833 TNRQ92752 1358 aa11.77□□□□□ -0.52
CLCN4-202ENST00000380833 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.52
CLCN4-202ENST00000380833 MGARPQ8TDB4 240 aa11.77□□□□□ -0.52
CLCN4-202ENST00000380833 KCNG4Q8TDN1 519 aa11.77□□□□□ -0.52
CLCN4-202ENST00000380833 TBC1D22AQ8WUA7 517 aa11.77□□□□□ -0.52
CLCN4-202ENST00000380833 GCNT3O95395 438 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 IGHDP01880 384 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 CYP2C19P33261 490 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 KCNQ4P56696 695 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 PDE4DQ08499 809 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 ALDH1L2Q3SY69 923 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 SPC25Q9HBM1 224 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 PRKAG2Q9UGJ0 569 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 PALM3A6NDB9 673 aaPredicted RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 CAPN1P07384 714 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 STAT2P52630 851 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 DHX9Q08211 1270 aaKnown RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 TPH2Q8IWU9 490 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 CTAGE3PQ8IX95 158 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 NSMCE1Q8WV22 266 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 SNRNP27Q8WVK2 155 aaKnown RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 TUBB6Q9BUF5 446 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 RNF113AO15541 343 aaKnown RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 TRPC1P48995 793 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 SV2BQ7L1I2 683 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 CEP19Q96LK0 163 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 PRDM5Q9NQX1 630 aaPredicted RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 ESYT2A0FGR8 921 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 HNRNPCL2B2RXH8 293 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 HNRNPCL1O60812 293 aaKnown RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 BAG6P46379 1132 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 GTF2IP78347 998 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 RNF217Q8TC41 542 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 ADAM21Q9UKJ8 722 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 POLIQ9UNA4 740 aa11.77□□□□□ -0.53
CLCN4-202ENST00000380833 TMA7Q9Y2S6 64 aaKnown RBP11.77□□□□□ -0.53
CLCN4-202ENST00000380833 TROQ12816 1431 aaPredicted RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 TRIM66O15016 1216 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 KRT14P02533 472 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 PLCG2P16885 1265 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 GYS2P54840 703 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 GDAP1L1Q96MZ0 367 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 HECW1Q76N89 1606 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 A0A1B0GVL5 298 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 ALAS1P13196 640 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 TNNI1P19237 187 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms