RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 A0A1W2PQC6 194 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 USP17L3A6NCW0 530 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 USP17L4A6NCW7 530 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 PP2D1A8MPX8 630 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 LGALS16A8MUM7 142 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 TYW1BQ6NUM6 668 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 USP17L1Q7RTZ2 530 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 SH3RF3Q8TEJ3 882 aaPredicted RBP18.34■□□□□ 0.53
VPS16-203ENST00000380469 NOC3LQ8WTT2 800 aaKnown RBP18.34■□□□□ 0.53
VPS16-203ENST00000380469 CCDC47Q96A33 483 aaKnown RBP18.34■□□□□ 0.53
VPS16-203ENST00000380469 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 ANKZF1Q9H8Y5 726 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 CTAGE15A4D2H0 777 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 ZBTB22O15209 634 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 NDUFA10O95299 355 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 CTAGE8P0CG41 777 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 PRPHP41219 470 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 SMIM5Q71RC9 77 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 CTAGE6Q86UF2 777 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 CTAGE4Q8IX94 777 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 MSANTD4Q8NCY6 345 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 CUEDC2Q9H467 287 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.33■□□□□ 0.53
VPS16-203ENST00000380469 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.53
VPS16-203ENST00000380469 MTMR7Q9Y216 660 aa18.33■□□□□ 0.53
VPS16-203ENST00000380469 TTC26A0AVF1 554 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 STXBP3O00186 592 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 RHOBTB3O94955 611 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 ABL1P00519 1130 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
VPS16-203ENST00000380469 PLIN2Q99541 437 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 CHP1Q99653 195 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 MAGEF1Q9HAY2 307 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 KBTBD4Q9NVX7 518 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 ANKIB1Q9P2G1 1089 aa18.33■□□□□ 0.52
VPS16-203ENST00000380469 KLRC4O43908 158 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 DHTKD1Q96HY7 919 aaPredicted RBP18.32■□□□□ 0.52
VPS16-203ENST00000380469 RAB21Q9UL25 225 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 MYO6Q9UM54 1294 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 CAPN11Q9UMQ6 739 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 STX8Q9UNK0 236 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 ROBO3Q96MS0 1386 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 NUTM2BA6NNL0 878 aaPredicted RBP18.32■□□□□ 0.52
VPS16-203ENST00000380469 NUTM2EB1AL46 878 aaPredicted RBP18.32■□□□□ 0.52
VPS16-203ENST00000380469 RPS6KA4O75676 772 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 DNM2P50570 870 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 GPS2Q13227 327 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 RC3H1Q5TC82 1133 aaKnown RBP18.32■□□□□ 0.52
VPS16-203ENST00000380469 AK8Q96MA6 479 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 DNAJC7Q99615 494 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 ZNF287Q9HBT7 754 aa18.32■□□□□ 0.52
VPS16-203ENST00000380469 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
VPS16-203ENST00000380469 CYTH3O43739 400 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 TUBBP07437 444 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 LDHCP07864 332 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 PMS1P54277 932 aaKnown RBP18.31■□□□□ 0.52
VPS16-203ENST00000380469 HDXQ7Z353 690 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 ZNF507Q8TCN5 953 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 TGFBRAP1Q8WUH2 860 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 GUCA1BQ9UMX6 200 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 MAP2K7O14733 419 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 TM4SF1P30408 202 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 CABP7Q86V35 215 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 HAUS4Q9H6D7 363 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
VPS16-203ENST00000380469 CALCOCO1Q9P1Z2 691 aa18.31■□□□□ 0.52
VPS16-203ENST00000380469 IRS2Q9Y4H2 1338 aa18.3■□□□□ 0.52
VPS16-203ENST00000380469 BICDL2A1A5D9 508 aa18.3■□□□□ 0.52
VPS16-203ENST00000380469 PPP4CP60510 307 aa18.3■□□□□ 0.52
VPS16-203ENST00000380469 BEND6Q5SZJ8 279 aaPredicted RBP18.3■□□□□ 0.52
VPS16-203ENST00000380469 KRT25Q7Z3Z0 450 aa18.3■□□□□ 0.52
VPS16-203ENST00000380469 GBP3Q9H0R5 595 aa18.3■□□□□ 0.52
VPS16-203ENST00000380469 LEMD3Q9Y2U8 911 aa18.3■□□□□ 0.52
VPS16-203ENST00000380469 KLRF2D3W0D1 207 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 RHOXF2BP0C7M4 288 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 NAPAP54920 295 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 KRT83P78385 493 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 SLC35G1Q2M3R5 365 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 TTI2Q6NXR4 508 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 CSGALNACT2Q8N6G5 542 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 PNKPQ96T60 521 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 RHOXF2Q9BQY4 288 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 NUP58Q9BVL2 599 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 EXOC1Q9NV70 894 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 ZNHIT6Q9NWK9 470 aaKnown RBP18.29■□□□□ 0.52
VPS16-203ENST00000380469 OR52Z1P0C646 297 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 DIXDC1Q155Q3 683 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 FAM114A1Q8IWE2 563 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 TXLNBQ8N3L3 684 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 TUBGCP2Q9BSJ2 902 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 ZMYND12Q9H0C1 365 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 C6orf50Q9HD87 102 aa18.29■□□□□ 0.52
VPS16-203ENST00000380469 REXO2Q9Y3B8 237 aaKnown RBP18.29■□□□□ 0.52
VPS16-203ENST00000380469 GNPATO15228 680 aa18.28■□□□□ 0.52
VPS16-203ENST00000380469 CCNT1O60563 726 aaKnown RBP18.28■□□□□ 0.52
VPS16-203ENST00000380469 GOLGA8HP0CJ92 632 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms