RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 EPN1Q9Y6I3 576 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 CAPN7Q9Y6W3 813 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 EBAG9O00559 213 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 SCG2P13521 617 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 NAP1L1P55209 391 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 RNASE9P60153 205 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 MECOMQ03112 1051 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 KAT14Q9H8E8 782 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 COL5A2P05997 1499 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 H0YHG0 523 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 INPP5BP32019 993 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 TRIML1Q8N9V2 468 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 MSANTD4Q8NCY6 345 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 PANX2Q96RD6 677 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 KANSL2Q9H9L4 492 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 ATP1A1P05023 1023 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 IL6STP40189 918 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 TCP11X2Q5H9J9 407 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 DYMQ7RTS9 669 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 RNF217Q8TC41 542 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 FAM84BQ96KN1 310 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 MYO6Q9UM54 1294 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
PRPF40B-202ENST00000380281 PRPF3O43395 683 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 IDEP14735 1019 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 MTIF2P46199 727 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 CEP112Q8N8E3 955 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 GJA10Q969M2 543 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 SGSM3Q96HU1 749 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 CTAGE1Q96RT6 745 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 MMS19Q96T76 1030 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 AKAP11Q9UKA4 1901 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 PLEKP08567 350 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 SIK1P57059 783 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 DZIP1Q86YF9 867 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 ZNF512BQ96KM6 892 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 NEBLO76041 1014 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 SSBP05455 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 FCER1AP12319 257 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 USP8P40818 1118 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 TBC1D8BQ0IIM8 1120 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 FUT2Q10981 343 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 NPY5RQ15761 445 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 CDKAL1Q5VV42 579 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 CYP26C1Q6V0L0 522 aa13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 SRP68Q9UHB9 627 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-202ENST00000380281 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 NDUFA10O95299 355 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 ASIC1P78348 528 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 DTHD1Q6ZMT9 781 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 CSGALNACT2Q8N6G5 542 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 FERMT2Q96AC1 680 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 SLC39A2Q9NP94 309 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 MYH8P13535 1937 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 PRPF6O94906 941 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 PAX7P23759 505 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 ARID5AQ03989 594 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 TMTC1Q8IUR5 882 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 N4BP2L2Q92802 583 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 TRPM3Q9HCF6 1732 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-202ENST00000380281 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 IPO7O95373 1038 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 TECP42680 631 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 BLIDQ8IZY5 108 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 PNMA1Q8ND90 353 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 TANGO6Q9C0B7 1094 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 MINPP1Q9UNW1 487 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 TJP1Q07157 1748 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 USP54Q70EL1 1684 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 RCCD1A6NED2 376 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 GGCXP38435 758 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 ARHGAP25P42331 645 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 ATP2C1P98194 919 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 PDE4DQ08499 809 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 C2orf54Q08AI8 447 aa13.89□□□□□ -0.19
PRPF40B-202ENST00000380281 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms