RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 EXOC3O60645 756 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 TECP42680 631 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 DNM2P50570 870 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 PSMD6Q15008 389 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 SNCBQ16143 134 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 SDCCAG8Q86SQ7 713 aaPredicted RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 CCDC170Q8IYT3 715 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 RPGRIP1Q96KN7 1286 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 MAST3O60307 1309 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 KRIT1O00522 736 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 ABCB4P21439 1286 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 TBC1D31Q96DN5 1066 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 DPH5Q9H2P9 285 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 NOSTRINQ8IVI9 506 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 CCDC13Q8IYE1 715 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 BCAS4Q8TDM0 211 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 GBP5Q96PP8 586 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 C21orf2O43822 256 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 CCT5P48643 541 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 PHLDB2Q86SQ0 1253 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 RRP15Q9Y3B9 282 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 KDRP35968 1356 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 PPEF1O14829 653 aaPredicted RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 HOXB7P09629 217 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 ALAS1P13196 640 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 SLC8A3P57103 927 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 EIF4A1P60842 406 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 ADAT2Q7Z6V5 191 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 INSRP06213 1382 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 ZNF853P0CG23 659 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 STX2P32856 288 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 FAM135BQ49AJ0 1406 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 KIAA1841Q6NSI8 718 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 ZNF654Q8IZM8 581 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 SYNJ2BP-COX16A0A087WUM0 186 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 MRFAP1L1Q96HT8 127 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 COX16Q9P0S2 106 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 UBN2Q6ZU65 1347 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 SLC4A1P02730 911 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 CCDC89Q8N998 374 aa13.17□□□□□ -0.3
PCDHA9-201ENST00000378122 SMCO2A6NFE2 343 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 DCUN1D2Q6PH85 259 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 ACRBPQ8NEB7 543 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 HACE1Q8IYU2 909 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 RILPQ96NA2 401 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 GNA14O95837 355 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 CMA1P23946 247 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 CUL4BQ13620 913 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 C11orf57Q6ZUT1 292 aaPredicted RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 NUCKS1Q9H1E3 243 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 TFAP4Q01664 338 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 CCDC157Q569K6 752 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 CYP2J2P51589 502 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 UHMK1Q8TAS1 419 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 DPF3Q92784 378 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 MED4Q9NPJ6 270 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 PANK4Q9NVE7 773 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 TTC36A6NLP5 189 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 RNF40O75150 1001 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
PCDHA9-201ENST00000378122 PTPRTO14522 1441 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 A0A087WWV3 80 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 BCAMP50895 628 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 ETF1P62495 437 aaKnown RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 DIXDC1Q155Q3 683 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 ADCK5Q3MIX3 580 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 PARD3BQ8TEW8 1205 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 SKA2Q8WVK7 121 aaPredicted RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 BZW2Q9Y6E2 419 aaKnown RBP13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 KDM5CP41229 1560 aa13.15□□□□□ -0.3
PCDHA9-201ENST00000378122 KCNQ3O43525 872 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms