RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 FLOT1O75955 427 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 RASSF7Q02833 373 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 NBPF9Q3BBW0 867 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 CERS5Q8N5B7 392 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 IQUBQ8NA54 791 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 CAPZA3Q96KX2 299 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 RGS17Q9UGC6 210 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-203ENST00000378037 EPB41L2O43491 1005 aaKnown RBP9.13□□□□□ -0.95
CKAP2-203ENST00000378037 MYL5Q02045 173 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 GPR162Q16538 588 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 CALCRLQ16602 461 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 C12orf60Q5U649 245 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 KRT79Q5XKE5 535 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 CACNA2D4Q7Z3S7 1137 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 CCDC148Q8NFR7 591 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 PIGOQ8TEQ8 1089 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 DPF2Q92785 391 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 PUF60Q9UHX1 559 aaKnown RBP9.13□□□□□ -0.95
CKAP2-203ENST00000378037 POLRMTO00411 1230 aaKnown RBP9.13□□□□□ -0.95
CKAP2-203ENST00000378037 CTAGE5O15320 804 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 ADCY7P51828 1080 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 CUL4BQ13620 913 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 HERC4Q5GLZ8 1057 aaPredicted RBP9.13□□□□□ -0.95
CKAP2-203ENST00000378037 KRBA2Q6ZNG9 492 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 TMTC3Q6ZXV5 915 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 ACER1Q8TDN7 264 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 TBC1D22AQ8WUA7 517 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 TMEM60Q9H2L4 133 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 BCORQ6W2J9 1755 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 SRGNP10124 158 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 GNA11P29992 359 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 CABP7Q86V35 215 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 POTEDQ86YR6 584 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 BRIP1Q9BX63 1249 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 GUCA1BQ9UMX6 200 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 BTAF1O14981 1849 aa9.13□□□□□ -0.95
CKAP2-203ENST00000378037 USP27XA6NNY8 438 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 TMCO5BA8MYB1 307 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 TRAF5O00463 557 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 PSMD14O00487 310 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 RASA1P20936 1047 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 LIFRP42702 1097 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 MCM6Q14566 821 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 TYW1BQ6NUM6 668 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 DPH6Q7L8W6 267 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 KIAA1328Q86T90 577 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 SYCP3Q8IZU3 236 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 PPP1R13LQ8WUF5 828 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 CNKSR1Q969H4 720 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
CKAP2-203ENST00000378037 ZNF341Q9BYN7 854 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 TJP1Q07157 1748 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 BACH1O14867 736 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 EIF2AK2P19525 551 aaKnown RBP9.12□□□□□ -0.95
CKAP2-203ENST00000378037 GNAQP50148 359 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 SLC15A2Q16348 729 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 IL17RBQ9NRM6 502 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
CKAP2-203ENST00000378037 RBM28Q9NW13 759 aaKnown RBP9.12□□□□□ -0.95
CKAP2-203ENST00000378037 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 MACROD2A1Z1Q3 448 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 YEATS4O95619 227 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 TROAPQ12815 778 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 KIF4BQ2VIQ3 1234 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 TFR2Q9UP52 801 aa9.12□□□□□ -0.95
CKAP2-203ENST00000378037 PXDNLA1KZ92 1463 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 FAM205AQ6ZU69 1335 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 CUTAO60888 179 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 SPP2Q13103 211 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 CCDC12Q8WUD4 166 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-203ENST00000378037 TBC1D5Q92609 795 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 SCLT1Q96NL6 688 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 NPHP3-ACAD11A0A0J9YXS1 232 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 F5H6K3 240 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 CMA1P23946 247 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 CLCN1P35523 988 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 KLRC3Q07444 240 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 SNW1Q13573 536 aaKnown RBP9.11□□□□□ -0.95
CKAP2-203ENST00000378037 RAPGEF1Q13905 1077 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 CSGALNACT2Q8N6G5 542 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 IGSF22Q8N9C0 903 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 TDRD7Q8NHU6 1098 aaKnown RBP9.11□□□□□ -0.95
CKAP2-203ENST00000378037 ELMO3Q96BJ8 720 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 ATP6V0A2Q9Y487 856 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 TTLL1O95922 423 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 NELFBQ8WX92 580 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 SLF1Q9BQI6 1058 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 RNF26Q9BY78 433 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-203ENST00000378037 GLIS2Q9BZE0 524 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-203ENST00000378037 PDCL3Q9H2J4 239 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 PCDHA12Q9UN75 941 aa9.11□□□□□ -0.95
CKAP2-203ENST00000378037 CNTNAP4Q9C0A0 1308 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 PLCG1P19174 1290 aa9.1□□□□□ -0.95
CKAP2-203ENST00000378037 TOB1P50616 345 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 MRPL12P52815 198 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 UTP14CQ5TAP6 766 aaKnown RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 FMR1NBQ8N0W7 255 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-203ENST00000378037 ZKSCAN4Q969J2 545 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms