RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NR2E3Q9Y5X4 410 aa19.76■□□□□ 0.75
HMGN4-201ENST00000377575 ZNF536O15090 1300 aa19.76■□□□□ 0.75
HMGN4-201ENST00000377575 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
HMGN4-201ENST00000377575 MCM3APO60318 1980 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 EVI5O60447 810 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 MNX1P50219 401 aaPredicted RBP19.75■□□□□ 0.75
HMGN4-201ENST00000377575 SYDE2Q5VT97 1194 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 CCDC174Q6PII3 467 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 BTNL9Q6UXG8 535 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 ZSCAN10Q96SZ4 725 aaPredicted RBP19.75■□□□□ 0.75
HMGN4-201ENST00000377575 UBAC1Q9BSL1 405 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 KAT14Q9H8E8 782 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 RNF146Q9NTX7 359 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 U3KPZ7 1027 aaPredicted RBP19.75■□□□□ 0.75
HMGN4-201ENST00000377575 SYNGAP1Q96PV0 1343 aa19.75■□□□□ 0.75
HMGN4-201ENST00000377575 DNAJC25-GNG10A0A024R161 153 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 SNHG28P0DPA3 235 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 ZNF543Q08ER8 600 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 TRDNQ13061 729 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 GPATCH4Q5T3I0 446 aaKnown RBP19.74■□□□□ 0.75
HMGN4-201ENST00000377575 ZNF467Q7Z7K2 595 aaPredicted RBP19.74■□□□□ 0.75
HMGN4-201ENST00000377575 AGBL1Q96MI9 1066 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 RANBP17Q9H2T7 1088 aaKnown RBP19.74■□□□□ 0.75
HMGN4-201ENST00000377575 GPCPD1Q9NPB8 672 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 CCPG1Q9ULG6 757 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 CNPY2Q9Y2B0 182 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 MYH6P13533 1939 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 PFASO15067 1338 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 TNKSO95271 1327 aa19.74■□□□□ 0.75
HMGN4-201ENST00000377575 SMCHD1A6NHR9 2005 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 H0YGN5 161 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 ICAM1P05362 532 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 ALAS1P13196 640 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 SLC16A2P36021 539 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 PTH1RQ03431 593 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 TTBK2Q6IQ55 1244 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 PNMA1Q8ND90 353 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 ANKS1AQ92625 1134 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 TRERF1Q96PN7 1200 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 ZSWIM5Q9P217 1185 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 PNMA2Q9UL42 364 aa19.73■□□□□ 0.75
HMGN4-201ENST00000377575 DNM1LO00429 736 aa19.72■□□□□ 0.75
HMGN4-201ENST00000377575 SNAP25P60880 206 aa19.72■□□□□ 0.75
HMGN4-201ENST00000377575 PRAMEF19Q5SWL8 479 aa19.72■□□□□ 0.75
HMGN4-201ENST00000377575 MAMDC4Q6UXC1 1216 aa19.72■□□□□ 0.75
HMGN4-201ENST00000377575 ENAHQ8N8S7 591 aaPredicted RBP19.72■□□□□ 0.75
HMGN4-201ENST00000377575 LCTP09848 1927 aa19.72■□□□□ 0.75
HMGN4-201ENST00000377575 LRRC37A2A6NM11 1700 aa19.71■□□□□ 0.75
HMGN4-201ENST00000377575 CYP21A2P08686 494 aa19.71■□□□□ 0.75
HMGN4-201ENST00000377575 COL6A1P12109 1028 aa19.71■□□□□ 0.75
HMGN4-201ENST00000377575 BMP2KLQ5H9B9 411 aa19.71■□□□□ 0.75
HMGN4-201ENST00000377575 KIAA1211Q6ZU35 1233 aa19.71■□□□□ 0.75
HMGN4-201ENST00000377575 ARRDC4Q8NCT1 418 aa19.71■□□□□ 0.75
HMGN4-201ENST00000377575 A1CFQ9NQ94 594 aaKnown RBP19.71■□□□□ 0.75
HMGN4-201ENST00000377575 KBTBD13C9JR72 458 aa19.7■□□□□ 0.74
HMGN4-201ENST00000377575 POTEB2H3BUK9 544 aa19.7■□□□□ 0.74
HMGN4-201ENST00000377575 RARBP10826 455 aa19.7■□□□□ 0.74
HMGN4-201ENST00000377575 AKR1A1P14550 325 aa19.7■□□□□ 0.74
HMGN4-201ENST00000377575 ASPRV1Q53RT3 343 aa19.7■□□□□ 0.74
HMGN4-201ENST00000377575 IFIT1BQ5T764 474 aaKnown RBP19.7■□□□□ 0.74
HMGN4-201ENST00000377575 RALYLQ86SE5 291 aaKnown RBP19.7■□□□□ 0.74
HMGN4-201ENST00000377575 CCDC136Q96JN2 1154 aa19.7■□□□□ 0.74
HMGN4-201ENST00000377575 NEFLP07196 543 aa19.69■□□□□ 0.74
HMGN4-201ENST00000377575 ANO1Q5XXA6 986 aa19.69■□□□□ 0.74
HMGN4-201ENST00000377575 MAP4K1Q92918 833 aa19.69■□□□□ 0.74
HMGN4-201ENST00000377575 ZHX1Q9UKY1 873 aaPredicted RBP19.69■□□□□ 0.74
HMGN4-201ENST00000377575 PARP1P09874 1014 aaKnown RBP19.68■□□□□ 0.74
HMGN4-201ENST00000377575 ZNF865P0CJ78 1059 aaPredicted RBP19.68■□□□□ 0.74
HMGN4-201ENST00000377575 SART3Q15020 963 aaKnown RBP19.68■□□□□ 0.74
HMGN4-201ENST00000377575 MUM1L1Q5H9M0 696 aa19.68■□□□□ 0.74
HMGN4-201ENST00000377575 ARMCX2Q7L311 632 aa19.68■□□□□ 0.74
HMGN4-201ENST00000377575 C7orf61Q8IZ16 206 aa19.68■□□□□ 0.74
HMGN4-201ENST00000377575 FAM133AQ8N9E0 248 aa19.68■□□□□ 0.74
HMGN4-201ENST00000377575 NCOA7Q8NI08 942 aa19.68■□□□□ 0.74
HMGN4-201ENST00000377575 XPNPEP3Q9NQH7 507 aa19.68■□□□□ 0.74
HMGN4-201ENST00000377575 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.68■□□□□ 0.74
HMGN4-201ENST00000377575 RBM8AQ9Y5S9 174 aaKnown RBP19.68■□□□□ 0.74
HMGN4-201ENST00000377575 WDR19Q8NEZ3 1342 aa19.68■□□□□ 0.74
HMGN4-201ENST00000377575 ERICH2A1L162 156 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 SNAI1O95863 264 aaPredicted RBP19.67■□□□□ 0.74
HMGN4-201ENST00000377575 GOLGA8HP0CJ92 632 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 TAL1P17542 331 aaPredicted RBP19.67■□□□□ 0.74
HMGN4-201ENST00000377575 GJC2Q5T442 439 aaPredicted RBP19.67■□□□□ 0.74
HMGN4-201ENST00000377575 NSMFQ6X4W1 530 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 CYB5R4Q7L1T6 521 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 FGD4Q96M96 766 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 ESYT1Q9BSJ8 1104 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 SENP6Q9GZR1 1112 aaPredicted RBP19.67■□□□□ 0.74
HMGN4-201ENST00000377575 ABHD16BQ9H3Z7 469 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 CYP39A1Q9NYL5 469 aa19.67■□□□□ 0.74
HMGN4-201ENST00000377575 ASB14A6NK59 587 aa19.66■□□□□ 0.74
HMGN4-201ENST00000377575 E7EWF7 191 aa19.66■□□□□ 0.74
HMGN4-201ENST00000377575 MYCNP04198 464 aaPredicted RBP19.66■□□□□ 0.74
HMGN4-201ENST00000377575 CNTN2Q02246 1040 aa19.66■□□□□ 0.74
HMGN4-201ENST00000377575 SEC23AQ15436 765 aa19.66■□□□□ 0.74
HMGN4-201ENST00000377575 CASC1Q6TDU7 716 aa19.66■□□□□ 0.74
HMGN4-201ENST00000377575 CCDC144CPQ8IYA2 1237 aa19.66■□□□□ 0.74
HMGN4-201ENST00000377575 FAM184BQ9ULE4 1060 aa19.66■□□□□ 0.74
HMGN4-201ENST00000377575 DNAH12Q6ZR08 3092 aa19.65■□□□□ 0.74
HMGN4-201ENST00000377575 ACVR2BQ13705 512 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms