RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 LETM2Q2VYF4 491 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 CCDC178Q5BJE1 867 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 MAPKAPK5Q8IW41 473 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 MB21D1Q8N884 522 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 CAPZA3Q96KX2 299 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 H7C1D1 291 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 PHACTR2O75167 634 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 TSR1Q2NL82 804 aaKnown RBP20.36■□□□□ 0.85
SF1-203ENST00000377387 ARL6IP4Q66PJ3 421 aaKnown RBP20.36■□□□□ 0.85
SF1-203ENST00000377387 ZNF444Q8N0Y2 327 aaPredicted RBP20.36■□□□□ 0.85
SF1-203ENST00000377387 HINFPQ9BQA5 517 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 AGPAT5Q9NUQ2 364 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 PHLPP1O60346 1717 aa20.36■□□□□ 0.85
SF1-203ENST00000377387 BRD3Q15059 726 aa20.35■□□□□ 0.85
SF1-203ENST00000377387 OR8K1Q8NGG5 319 aa20.35■□□□□ 0.85
SF1-203ENST00000377387 MAGEC2Q9UBF1 373 aaPredicted RBP20.35■□□□□ 0.85
SF1-203ENST00000377387 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
SF1-203ENST00000377387 MYO6Q9UM54 1294 aa20.35■□□□□ 0.85
SF1-203ENST00000377387 BEND6Q5SZJ8 279 aaPredicted RBP20.35■□□□□ 0.85
SF1-203ENST00000377387 UBXN6Q9BZV1 441 aa20.35■□□□□ 0.85
SF1-203ENST00000377387 GNPATO15228 680 aa20.34■□□□□ 0.85
SF1-203ENST00000377387 LMAN1P49257 510 aa20.34■□□□□ 0.85
SF1-203ENST00000377387 C12orf60Q5U649 245 aa20.34■□□□□ 0.85
SF1-203ENST00000377387 PYM1Q9BRP8 204 aaKnown RBP20.34■□□□□ 0.85
SF1-203ENST00000377387 VPS18Q9P253 973 aa20.34■□□□□ 0.85
SF1-203ENST00000377387 NKRFO15226 690 aaKnown RBP eCLIP20.34■□□□□ 0.858e-7■■■□□ 14.6
SF1-203ENST00000377387 CCDC122Q5T0U0 273 aa20.34■□□□□ 0.85
SF1-203ENST00000377387 CSGALNACT2Q8N6G5 542 aa20.34■□□□□ 0.85
SF1-203ENST00000377387 PSMA7O14818 248 aa20.33■□□□□ 0.85
SF1-203ENST00000377387 CCNT1O60563 726 aaKnown RBP20.33■□□□□ 0.85
SF1-203ENST00000377387 LDHBP07195 334 aaKnown RBP20.33■□□□□ 0.85
SF1-203ENST00000377387 TRIM21P19474 475 aaKnown RBP20.33■□□□□ 0.85
SF1-203ENST00000377387 NGLY1Q96IV0 654 aa20.33■□□□□ 0.85
SF1-203ENST00000377387 PLCG1P19174 1290 aa20.33■□□□□ 0.85
SF1-203ENST00000377387 STIM1Q13586 685 aa20.33■□□□□ 0.85
SF1-203ENST00000377387 SBK1Q52WX2 424 aa20.33■□□□□ 0.85
SF1-203ENST00000377387 GDAP1L1Q96MZ0 367 aa20.33■□□□□ 0.85
SF1-203ENST00000377387 ADAM21Q9UKJ8 722 aa20.33■□□□□ 0.85
SF1-203ENST00000377387 KLRC4O43908 158 aa20.33■□□□□ 0.84
SF1-203ENST00000377387 FCER1AP12319 257 aa20.33■□□□□ 0.84
SF1-203ENST00000377387 PDE4DQ08499 809 aa20.33■□□□□ 0.84
SF1-203ENST00000377387 TXNRD1Q16881 649 aa20.33■□□□□ 0.84
SF1-203ENST00000377387 KIAA1328Q86T90 577 aa20.33■□□□□ 0.84
SF1-203ENST00000377387 ZFP91Q96JP5 570 aaPredicted RBP20.33■□□□□ 0.84
SF1-203ENST00000377387 LGALS16A8MUM7 142 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 TECP42680 631 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 NAPAP54920 295 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 CYP27A1Q02318 531 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 TRIM14Q14142 442 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 WDR59Q6PJI9 974 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 SMARCC1Q92922 1105 aaPredicted RBP20.32■□□□□ 0.84
SF1-203ENST00000377387 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 TUBGCP2Q9BSJ2 902 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 CDCA7Q9BWT1 371 aaPredicted RBP20.32■□□□□ 0.84
SF1-203ENST00000377387 DUSP10Q9Y6W6 482 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 KLRF2D3W0D1 207 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 ZMYND10O75800 440 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 FECHP22830 423 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 ASIC1P78348 528 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 TBC1D8BQ0IIM8 1120 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 TAF3Q5VWG9 929 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 USP17L2Q6R6M4 530 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 CABP7Q86V35 215 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 DGKHQ86XP1 1220 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 CCDC102AQ96A19 550 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 CALCOCO1Q9P1Z2 691 aa20.32■□□□□ 0.84
SF1-203ENST00000377387 ZPR1O75312 459 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 ATP1A1P05023 1023 aaKnown RBP20.31■□□□□ 0.84
SF1-203ENST00000377387 STK4Q13043 487 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 HDXQ7Z353 690 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 A0A1B0GUL6 1792 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 STXBP3O00186 592 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 ERLIN1O75477 346 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 MTIF2P46199 727 aaKnown RBP20.31■□□□□ 0.84
SF1-203ENST00000377387 HERVK_113P62684 666 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 GRM4Q14833 912 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 ANKRD2Q9GZV1 360 aa20.31■□□□□ 0.84
SF1-203ENST00000377387 MAP2K7O14733 419 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 ANKRD40Q6AI12 368 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 TCP11L1Q9NUJ3 509 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 MACROD2A1Z1Q3 448 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 GPS2Q13227 327 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 UBA5Q9GZZ9 404 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 RCCD1A6NED2 376 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 NFIXQ14938 502 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 WHAMMP3Q1A5X7 153 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 TTI2Q6NXR4 508 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 MSANTD4Q8NCY6 345 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 DUSP9Q99956 384 aaKnown RBP20.3■□□□□ 0.84
SF1-203ENST00000377387 LACRTQ9GZZ8 138 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 BARHL2Q9NY43 387 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 BIN2Q9UBW5 565 aaPredicted RBP20.3■□□□□ 0.84
SF1-203ENST00000377387 L1RE1Q9UN81 338 aa20.3■□□□□ 0.84
SF1-203ENST00000377387 THRAP3Q9Y2W1 955 aaKnown RBP20.3■□□□□ 0.84
SF1-203ENST00000377387 M0R2N6 131 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 TPTE2Q6XPS3 522 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 ZNF507Q8TCN5 953 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 UIMC1Q96RL1 719 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 MMS19Q96T76 1030 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms