RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
CBWD3-203ENST00000377344 BARHL2Q9NY43 387 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 HOXC10Q9NYD6 342 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
CBWD3-203ENST00000377344 PPP1R11O60927 126 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-203ENST00000377344 ZBED4O75132 1171 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 SLC10A3P09131 477 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 HOXA7P31268 230 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-203ENST00000377344 DSG3P32926 999 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 NAPAP54920 295 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 NLRP5P59047 1200 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 CPXCR1Q8N123 301 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 BRI3BPQ8WY22 251 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 CCDC102AQ96A19 550 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 AMNQ9BXJ7 453 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 PCDHA1Q9Y5I3 950 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 hCG_1984214I3L0E3 225 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 STXBP3O00186 592 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 VWA5AO00534 786 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
CBWD3-203ENST00000377344 OSBPP22059 807 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 GNL2Q13823 731 aaKnown RBP14.92□□□□□ -0.02
CBWD3-203ENST00000377344 GPAT2Q6NUI2 795 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 FERMT3Q86UX7 667 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 ZNF713Q8N859 430 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-203ENST00000377344 CCDC148Q8NFR7 591 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 CCDC12Q8WUD4 166 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-203ENST00000377344 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 MTMR6Q9Y217 621 aa14.92□□□□□ -0.02
CBWD3-203ENST00000377344 SPDYE16A6NNV3 312 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-203ENST00000377344 BTBD19C9JJ37 291 aa14.91□□□□□ -0.02
CBWD3-203ENST00000377344 ZSCAN22P10073 491 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-203ENST00000377344 SAFBQ15424 915 aaKnown RBP eCLIP14.91□□□□□ -0.02
CBWD3-203ENST00000377344 HHIPL1Q96JK4 782 aa14.91□□□□□ -0.02
CBWD3-203ENST00000377344 P2RX7Q99572 595 aaKnown RBP14.91□□□□□ -0.02
CBWD3-203ENST00000377344 ASCC2Q9H1I8 757 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-203ENST00000377344 SLC38A10Q9HBR0 1119 aa14.91□□□□□ -0.02
CBWD3-203ENST00000377344 SH3GLB2Q9NR46 395 aa14.91□□□□□ -0.02
CBWD3-203ENST00000377344 PDHXO00330 501 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 BRD1O95696 1058 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 MMP1P03956 469 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 FDX1P10109 184 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 TAL1P17542 331 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-203ENST00000377344 CYP4F22Q6NT55 531 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 TYW1BQ6NUM6 668 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 SHISA4Q96DD7 197 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 AGBL1Q96MI9 1066 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 PHF20Q9BVI0 1012 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 RAVER2Q9HCJ3 691 aaKnown RBP14.9□□□□□ -0.02
CBWD3-203ENST00000377344 BRMS1Q9HCU9 246 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 PNMA3Q9UL41 463 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 ZDHHC9Q9Y397 364 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 MYPNQ86TC9 1320 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 PARP14Q460N5 1801 aa14.9□□□□□ -0.02
CBWD3-203ENST00000377344 SMCO2A6NFE2 343 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 MANSC4A6NHS7 340 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-203ENST00000377344 FAM155AB1AL88 458 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-203ENST00000377344 TRAF1Q13077 416 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 PLS1Q14651 629 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 DEFB115Q30KQ5 88 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 ANKRD23Q86SG2 305 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 F13A1P00488 732 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 ICAM1P05362 532 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 CALML3P27482 149 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 HERVK_113P62684 666 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 DIS3L2Q8IYB7 885 aaKnown RBP14.89□□□□□ -0.03
CBWD3-203ENST00000377344 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 SMCR8Q8TEV9 937 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-203ENST00000377344 C6orf50Q9HD87 102 aa14.89□□□□□ -0.03
CBWD3-203ENST00000377344 ZNF536O15090 1300 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 RLFQ13129 1914 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 CYP2C8P10632 490 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 KRT2P35908 639 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 ADCY7P51828 1080 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 FOXD4L6Q3SYB3 417 aaPredicted RBP14.88□□□□□ -0.03
CBWD3-203ENST00000377344 PPP1R18Q6NYC8 613 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 FOXD4L3Q6VB84 417 aaPredicted RBP14.88□□□□□ -0.03
CBWD3-203ENST00000377344 PTPN18Q99952 460 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 PAGR1Q9BTK6 254 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 HOMER2Q9NSB8 354 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 ADAMTS5Q9UNA0 930 aa14.88□□□□□ -0.03
CBWD3-203ENST00000377344 BTBD18B2RXH4 712 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 ALAS1P13196 640 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 GNA11P29992 359 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 KIF23Q02241 960 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-203ENST00000377344 TMEM132BQ14DG7 1078 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 SNRNP48Q6IEG0 339 aaKnown RBP14.87□□□□□ -0.03
CBWD3-203ENST00000377344 RGS22Q8NE09 1264 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 OXER1Q8TDS5 423 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 ZMYND12Q9H0C1 365 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 PSTPIP2Q9H939 334 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 PCDHA4Q9UN74 947 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 SLC45A1Q9Y2W3 748 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 COL11A1P12107 1806 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-203ENST00000377344 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-203ENST00000377344 RASSF10A6NK89 507 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 KIF28PB7ZC32 967 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 PEX10O60683 326 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 INHBEP58166 350 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms