RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PMS1P54277 932 aaKnown RBP28.45■■■□□ 2.14
C9orf40-201ENST00000376854 SLC35G1Q2M3R5 365 aa28.45■■■□□ 2.14
C9orf40-201ENST00000376854 DAGLBQ8NCG7 672 aa28.45■■■□□ 2.14
C9orf40-201ENST00000376854 SH3RF3Q8TEJ3 882 aaPredicted RBP28.45■■■□□ 2.14
C9orf40-201ENST00000376854 TSPY3P0CV98 308 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 TSPY8P0CW00 308 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 MB21D1Q8N884 522 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 POTEB2H3BUK9 544 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 CCDC178Q5BJE1 867 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 GALNT17Q6IS24 598 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 PLIN2Q99541 437 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 CHP1Q99653 195 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 MTMR7Q9Y216 660 aa28.44■■■□□ 2.14
C9orf40-201ENST00000376854 LGALS16A8MUM7 142 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 CYTH3O43739 400 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 LDHBP07195 334 aaKnown RBP28.43■■■□□ 2.14
C9orf40-201ENST00000376854 STIM1Q13586 685 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 BARHL2Q9NY43 387 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 TTC26A0AVF1 554 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 KLRC4O43908 158 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 MYL1P05976 194 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 EEF1GP26641 437 aaKnown RBP28.43■■■□□ 2.14
C9orf40-201ENST00000376854 TUBB4BP68371 445 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 GPR101Q96P66 508 aaPredicted RBP28.43■■■□□ 2.14
C9orf40-201ENST00000376854 CCSER1Q9C0I3 900 aa28.43■■■□□ 2.14
C9orf40-201ENST00000376854 STXBP3O00186 592 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 PES1O00541 588 aaKnown RBP28.42■■■□□ 2.14
C9orf40-201ENST00000376854 AMOTL1Q8IY63 956 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 TRIM47Q96LD4 638 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 THAP9Q9H5L6 903 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 KBTBD4Q9NVX7 518 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 EPN1Q9Y6I3 576 aaPredicted RBP28.42■■■□□ 2.14
C9orf40-201ENST00000376854 PSMA7O14818 248 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 RHOBTB3O94955 611 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 NDUFA10O95299 355 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 TFRCP02786 760 aaKnown RBP28.42■■■□□ 2.14
C9orf40-201ENST00000376854 GRIK5Q16478 980 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 ZNF444Q8N0Y2 327 aaPredicted RBP28.42■■■□□ 2.14
C9orf40-201ENST00000376854 MSANTD4Q8NCY6 345 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 OR8K1Q8NGG5 319 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 ZCCHC17Q9NP64 241 aaKnown RBP28.42■■■□□ 2.14
C9orf40-201ENST00000376854 ZKSCAN7Q9P0L1 754 aaPredicted RBP28.42■■■□□ 2.14
C9orf40-201ENST00000376854 ROBO3Q96MS0 1386 aa28.42■■■□□ 2.14
C9orf40-201ENST00000376854 A0A1W2PQC6 194 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 WHAMMP3Q1A5X7 153 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 HNRNPLLQ8WVV9 542 aaKnown RBP28.41■■■□□ 2.14
C9orf40-201ENST00000376854 TCP11L1Q9NUJ3 509 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 ANKIB1Q9P2G1 1089 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 LUC7L2Q9Y383 392 aaKnown RBP28.41■■■□□ 2.14
C9orf40-201ENST00000376854 MYH8P13535 1937 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 LAD1O00515 517 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 NFIXQ14938 502 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 GIMAP8Q8ND71 665 aaPredicted RBP28.41■■■□□ 2.14
C9orf40-201ENST00000376854 WDR66Q8TBY9 1149 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 PNKPQ96T60 521 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 MAGEC2Q9UBF1 373 aaPredicted RBP28.41■■■□□ 2.14
C9orf40-201ENST00000376854 RAB21Q9UL25 225 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 STX8Q9UNK0 236 aa28.41■■■□□ 2.14
C9orf40-201ENST00000376854 CCDC88AQ3V6T2 1871 aa28.4■■■□□ 2.14
C9orf40-201ENST00000376854 SLC44A5Q8NCS7 719 aa28.4■■■□□ 2.14
C9orf40-201ENST00000376854 ZNF507Q8TCN5 953 aa28.4■■■□□ 2.14
C9orf40-201ENST00000376854 REXO2Q9Y3B8 237 aaKnown RBP28.4■■■□□ 2.14
C9orf40-201ENST00000376854 PRPHP41219 470 aa28.4■■■□□ 2.14
C9orf40-201ENST00000376854 DIXDC1Q155Q3 683 aa28.4■■■□□ 2.14
C9orf40-201ENST00000376854 DNAJC7Q99615 494 aa28.4■■■□□ 2.14
C9orf40-201ENST00000376854 TMEM47Q9BQJ4 181 aa28.4■■■□□ 2.14
C9orf40-201ENST00000376854 CTAGE15A4D2H0 777 aa28.39■■■□□ 2.14
C9orf40-201ENST00000376854 BAG3O95817 575 aa28.39■■■□□ 2.14
C9orf40-201ENST00000376854 CTAGE8P0CG41 777 aa28.39■■■□□ 2.14
C9orf40-201ENST00000376854 CTAGE6Q86UF2 777 aa28.39■■■□□ 2.14
C9orf40-201ENST00000376854 CTAGE4Q8IX94 777 aa28.39■■■□□ 2.14
C9orf40-201ENST00000376854 TGFBRAP1Q8WUH2 860 aa28.39■■■□□ 2.14
C9orf40-201ENST00000376854 PALM3A6NDB9 673 aaPredicted RBP28.38■■■□□ 2.13
C9orf40-201ENST00000376854 MAP2K7O14733 419 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 ZBTB22O15209 634 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 SEMA3FQ13275 785 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 TTI2Q6NXR4 508 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 FNBP4Q8N3X1 1017 aaPredicted RBP28.38■■■□□ 2.13
C9orf40-201ENST00000376854 CAPN11Q9UMQ6 739 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 GUCA1BQ9UMX6 200 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 GOLGA8HP0CJ92 632 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 RFC4P35249 363 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 GSTO1P78417 241 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 TSR1Q2NL82 804 aaKnown RBP28.38■■■□□ 2.13
C9orf40-201ENST00000376854 BEND6Q5SZJ8 279 aaPredicted RBP28.38■■■□□ 2.13
C9orf40-201ENST00000376854 LRRC15Q8TF66 581 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 USP21Q9UK80 565 aa28.38■■■□□ 2.13
C9orf40-201ENST00000376854 NOC3LQ8WTT2 800 aaKnown RBP28.37■■■□□ 2.13
C9orf40-201ENST00000376854 LZTS2Q9BRK4 669 aa28.37■■■□□ 2.13
C9orf40-201ENST00000376854 TRIM10Q9UDY6 481 aa28.37■■■□□ 2.13
C9orf40-201ENST00000376854 MYO6Q9UM54 1294 aa28.37■■■□□ 2.13
C9orf40-201ENST00000376854 ERLIN1O75477 346 aa28.37■■■□□ 2.13
C9orf40-201ENST00000376854 RHOXF2BP0C7M4 288 aa28.37■■■□□ 2.13
C9orf40-201ENST00000376854 AMPD2Q01433 879 aa28.37■■■□□ 2.13
C9orf40-201ENST00000376854 RHOXF2Q9BQY4 288 aa28.37■■■□□ 2.13
C9orf40-201ENST00000376854 NHSQ6T4R5 1651 aa28.36■■■□□ 2.13
C9orf40-201ENST00000376854 PLCG1P19174 1290 aa28.36■■■□□ 2.13
C9orf40-201ENST00000376854 CABP7Q86V35 215 aa28.36■■■□□ 2.13
C9orf40-201ENST00000376854 DHTKD1Q96HY7 919 aaPredicted RBP28.36■■■□□ 2.13
C9orf40-201ENST00000376854 CUEDC2Q9H467 287 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms