RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
PDPN-202ENST00000376057 MRPL12P52815 198 aaKnown RBP12.7□□□□□ -0.38
PDPN-202ENST00000376057 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 NONOQ15233 471 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDPN-202ENST00000376057 PIK3AP1Q6ZUJ8 805 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 TRPM4Q8TD43 1214 aa12.7□□□□□ -0.38
PDPN-202ENST00000376057 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
PDPN-202ENST00000376057 WDR90Q96KV7 1748 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 PFKFB1P16118 471 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
PDPN-202ENST00000376057 NDUFA8P51970 172 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 HIRAP54198 1017 aaPredicted RBP12.69□□□□□ -0.38
PDPN-202ENST00000376057 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 ANGEL2Q5VTE6 544 aaKnown RBP12.69□□□□□ -0.38
PDPN-202ENST00000376057 REXO1Q8N1G1 1221 aaKnown RBP12.69□□□□□ -0.38
PDPN-202ENST00000376057 AMNQ9BXJ7 453 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 MAF1Q9H063 256 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 GRIN3BO60391 1043 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 KCNA4P22459 653 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 STAT2P52630 851 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 QRICH1Q2TAL8 776 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
PDPN-202ENST00000376057 ILDR2Q71H61 639 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 MIGA2Q7L4E1 593 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 SCYL3Q8IZE3 742 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 CUL5Q93034 780 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
PDPN-202ENST00000376057 CPVLQ9H3G5 476 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 FAM13BQ9NYF5 915 aa12.69□□□□□ -0.38
PDPN-202ENST00000376057 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 WDR46O15213 610 aaKnown RBP12.68□□□□□ -0.38
PDPN-202ENST00000376057 ZNF202O95125 648 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 FDX1P10109 184 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 EPS15P42566 896 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 USP14P54578 494 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 CDC37Q16543 378 aaPredicted RBP12.68□□□□□ -0.38
PDPN-202ENST00000376057 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 ACER1Q8TDN7 264 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 VAT1LQ9HCJ6 419 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 SSC5DA1L4H1 1573 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 MARCKSP29966 332 aaPredicted RBP12.68□□□□□ -0.38
PDPN-202ENST00000376057 LONP1P36776 959 aaKnown RBP12.68□□□□□ -0.38
PDPN-202ENST00000376057 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 MOXD1Q6UVY6 613 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 C12orf42Q96LP6 360 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 AS3MTQ9HBK9 375 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 MTMR7Q9Y216 660 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
PDPN-202ENST00000376057 PARP14Q460N5 1801 aa12.68□□□□□ -0.38
PDPN-202ENST00000376057 TMEM232C9JQI7 657 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 XRCC6P12956 609 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDPN-202ENST00000376057 ECE1P42892 770 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 NBPF12Q5TAG4 269 aaPredicted RBP12.67□□□□□ -0.38
PDPN-202ENST00000376057 PPP4R3AQ6IN85 833 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 KANK3Q6NY19 840 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 BAZ2BQ9UIF8 2168 aaKnown RBP12.67□□□□□ -0.38
PDPN-202ENST00000376057 A0A1B0GVL5 298 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 SYKP43405 635 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 GHRHRQ02643 423 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 PTGDRQ13258 359 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 NEK8Q86SG6 692 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 KCNH3Q9ULD8 1083 aa12.67□□□□□ -0.38
PDPN-202ENST00000376057 FOSP01100 380 aaPredicted RBP12.66□□□□□ -0.38
PDPN-202ENST00000376057 GCFC2P16383 781 aaKnown RBP12.66□□□□□ -0.38
PDPN-202ENST00000376057 SLC16A2P36021 539 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 NOM1Q5C9Z4 860 aaKnown RBP12.66□□□□□ -0.38
PDPN-202ENST00000376057 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 COA7Q96BR5 231 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 RBSNQ9H1K0 784 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 C19orf81C9J6K1 198 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 SLC26A4O43511 780 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 DDNO94850 711 aaPredicted RBP12.66□□□□□ -0.38
PDPN-202ENST00000376057 USP11P51784 963 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 AK8Q96MA6 479 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 PCDHA1Q9Y5I3 950 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 CYP3A7-CYP3A51PA0A087WV96 503 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 WNT7AO00755 349 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 CYP3A7P24462 503 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 ZNF174Q15697 407 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 CRYGNQ8WXF5 182 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 MBOAT7Q96N66 472 aa12.66□□□□□ -0.38
PDPN-202ENST00000376057 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
PDPN-202ENST00000376057 CLIC6Q96NY7 704 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 CSRNP2Q9H175 543 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 MAP3K20Q9NYL2 800 aaKnown RBP12.65□□□□□ -0.38
PDPN-202ENST00000376057 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
PDPN-202ENST00000376057 UNCXA6NJT0 531 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms