RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 PSMD1Q99460 953 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 EIF3DO15371 548 aaKnown RBP eCLIP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 GCFC2P16383 781 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 SLFN12Q8IYM2 578 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 THAP9Q9H5L6 903 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 PA2G4Q9UQ80 394 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 PARP1P09874 1014 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 MCM7P33993 719 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 NEK9Q8TD19 979 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 GPAA1O43292 621 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 PLCB3Q01970 1234 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 MPRIPQ6WCQ1 1025 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 HEATR3Q7Z4Q2 680 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 N4BP2L2Q92802 583 aaPredicted RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 E7EWF7 191 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 MRPS25P82663 173 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 FKBP3Q00688 224 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 ISM2Q6H9L7 571 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 TADA3O75528 432 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ALCAMQ13740 583 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 CATSPER1Q8NEC5 780 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 MORC4Q8TE76 937 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 PHACTR3Q96KR7 559 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 PARD6BQ9BYG5 372 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 FOXP3Q9BZS1 431 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 BICC1Q9H694 974 aaKnown RBP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ZWINTO95229 277 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 UBE3CQ15386 1083 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 TTC25Q96NG3 672 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ARMCX3Q9UH62 379 aaPredicted RBP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ARHGAP10A1A4S6 786 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 KRT15P19012 456 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 SRLQ86TD4 932 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ARPP21Q9UBL0 812 aaPredicted RBP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 MYH3P11055 1940 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 CTNND1O60716 968 aaKnown RBP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 TNFAIP3P21580 790 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 DZIP3Q86Y13 1208 aaKnown RBP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ST13P4Q8IZP2 240 aaPredicted RBP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 COG1Q8WTW3 980 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 IP6K1Q92551 441 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ZFYVE16Q7Z3T8 1539 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 CLTAP09496 248 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 SLC8A3P57103 927 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 LRMPQ12912 555 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 IFT88Q13099 833 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 NONOQ15233 471 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 CCDC25Q86WR0 208 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 TEX11Q8IYF3 940 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 DLC1Q96QB1 1528 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 A0A1W2PQC6 194 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 CYP2E1P05181 493 aaPredicted RBP9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 TSC22D3Q99576 134 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 USP28Q96RU2 1077 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 USP40Q9NVE5 1235 aa9.66□□□□□ -0.86
SHROOM4-202ENST00000376020 ASPHQ12797 758 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 CRYMQ14894 314 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 RASIP1Q5U651 963 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 CCDC89Q8N998 374 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 FANCLQ9NW38 375 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 CREB3O43889 395 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 GUCY2CP25092 1073 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 AKNAD1Q5T1N1 836 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 LZICQ8WZA0 190 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 CCDC144CPQ8IYA2 1237 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 LINC00301Q8NCQ3 95 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 USP44Q9H0E7 712 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 JPH2Q9BR39 696 aaPredicted RBP9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 CARD10Q9BWT7 1032 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 MID2Q9UJV3 735 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 CYP7A1P22680 504 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 PCDHB13Q9Y5F0 798 aa9.65□□□□□ -0.86
SHROOM4-202ENST00000376020 RASGRF2O14827 1237 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 PFDN1O60925 122 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 NDUFA10O95299 355 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 SERPINB4P48594 390 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 COPS6Q7L5N1 327 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 CCDC82Q8N4S0 544 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 ZFP91Q96JP5 570 aaPredicted RBP9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 SERPINI1Q99574 410 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 ZSCAN20P17040 1043 aaPredicted RBP9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 L2HGDHQ9H9P8 463 aa9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 PPANQ9NQ55 473 aaKnown RBP9.65□□□□□ -0.87
SHROOM4-202ENST00000376020 COPB1P53618 953 aaKnown RBP9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 MAN2A1Q16706 1144 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 MCF2L2Q86YR7 1114 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 MYOCDQ8IZQ8 938 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 C17orf53Q8N3J3 647 aaPredicted RBP9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 PLEKHF1Q96S99 279 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms