RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 RYBPQ8N488 228 aaPredicted RBP15.04■□□□□ -0
COL4A1-201ENST00000375820 RIC8AQ9NPQ8 531 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 PPFIA1Q13136 1202 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 RAPH1Q70E73 1250 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 CLIC4Q9Y696 253 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 H7C0C1 242 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 KCNQ3O43525 872 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 ATP5OP48047 213 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 IFNAR2P48551 515 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 COG7P83436 770 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 HP1BP3Q5SSJ5 553 aaPredicted RBP15.03■□□□□ -0
COL4A1-201ENST00000375820 RAB3IPQ96QF0 476 aaPredicted RBP15.03■□□□□ -0
COL4A1-201ENST00000375820 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 SPDYE6P0CI01 402 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 BLIDQ8IZY5 108 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 CFAP61Q8NHU2 1237 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 PARD3BQ8TEW8 1205 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 C1orf112Q9NSG2 853 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 CLTAP09496 248 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 ARHGAP25P42331 645 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 CSADQ9Y600 493 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 POLR3AO14802 1390 aaPredicted RBP15.03■□□□□ -0
COL4A1-201ENST00000375820 MROH5Q6ZUA9 1318 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 LIG3P49916 1009 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 RASSF7Q02833 373 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 ARMCX5Q6P1M9 558 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 ANKRD35Q8N283 1001 aa15.03■□□□□ -0
COL4A1-201ENST00000375820 METTL14Q9HCE5 456 aaKnown RBP15.03■□□□□ -0
COL4A1-201ENST00000375820 ZNF148Q9UQR1 794 aa15.02■□□□□ -0
COL4A1-201ENST00000375820 POLGP54098 1239 aaPredicted RBP15.02■□□□□ -0
COL4A1-201ENST00000375820 YWHAGP61981 247 aaKnown RBP eCLIP15.02■□□□□ -0
COL4A1-201ENST00000375820 PPP4R4Q6NUP7 873 aa15.02■□□□□ -0
COL4A1-201ENST00000375820 KLHL14Q9P2G3 628 aa15.02■□□□□ -0
COL4A1-201ENST00000375820 BCL2L12Q9HB09 334 aa15.02■□□□□ -0
COL4A1-201ENST00000375820 FANCLQ9NW38 375 aa15.02■□□□□ -0
COL4A1-201ENST00000375820 PALM3A6NDB9 673 aaPredicted RBP15.02□□□□□ -0.01
COL4A1-201ENST00000375820 ZBTB24O43167 697 aaPredicted RBP15.02□□□□□ -0.01
COL4A1-201ENST00000375820 PHBP35232 272 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 DYNLT1P63172 113 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 TUBB2AQ13885 445 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 MESDQ14696 234 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 RFX6Q8HWS3 928 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 SMYD4Q8IYR2 804 aaPredicted RBP15.02□□□□□ -0.01
COL4A1-201ENST00000375820 TTC30BQ8N4P2 665 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 P3H4Q92791 437 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 USP28Q96RU2 1077 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 TUBB2BQ9BVA1 445 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 GLT8D2Q9H1C3 349 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 SGK1O00141 431 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 ARPP19P56211 112 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 PKP1Q13835 747 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 RMDN2Q96LZ7 410 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 TSKSQ9UJT2 592 aa15.02□□□□□ -0.01
COL4A1-201ENST00000375820 CLRN2A0PK11 232 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 ATF2P15336 505 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 PEX19P40855 299 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 CTSWP56202 376 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 HADHQ16836 314 aaKnown RBP15.01□□□□□ -0.01
COL4A1-201ENST00000375820 FAM178BQ8IXR5 827 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 RASGRP4Q8TDF6 673 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 PPP2R2CQ9Y2T4 447 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 BFSP1Q12934 665 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 MKRN3Q13064 507 aaKnown RBP15.01□□□□□ -0.01
COL4A1-201ENST00000375820 PARD3Q8TEW0 1356 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 POLR2MP0CAP2 368 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 CCDC84Q86UT8 332 aaPredicted RBP15.01□□□□□ -0.01
COL4A1-201ENST00000375820 ZBTB8OSQ8IWT0 167 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 SMAP1Q8IYB5 467 aaPredicted RBP15.01□□□□□ -0.01
COL4A1-201ENST00000375820 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 XAB2Q9HCS7 855 aaKnown RBP15.01□□□□□ -0.01
COL4A1-201ENST00000375820 PARP2Q9UGN5 583 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 SEPT9Q9UHD8 586 aaPredicted RBP15.01□□□□□ -0.01
COL4A1-201ENST00000375820 KRT3P12035 628 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 EHHADHQ08426 723 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 NT5C3AQ9H0P0 336 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 H7C1D1 291 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 TMEM191BP0C7N4 346 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 NDUFA8P51970 172 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 ADAM9Q13443 819 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 LRRC24Q50LG9 513 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 IFNL3Q8IZI9 196 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 SYMPKQ92797 1274 aaKnown RBP15.01□□□□□ -0.01
COL4A1-201ENST00000375820 HAUS2Q9NVX0 235 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 INPP5FQ9Y2H2 1132 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 STK24Q9Y6E0 443 aa15.01□□□□□ -0.01
COL4A1-201ENST00000375820 DBN1Q16643 649 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 CCDC93Q567U6 631 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 ZNF496Q96IT1 587 aaPredicted RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 SUDS3Q9H7L9 328 aaPredicted RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 TRPM2O94759 1503 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 SEC31AO94979 1220 aaKnown RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 LRRC41Q15345 812 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 GPR162Q16538 588 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 ZSCAN26Q16670 478 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 CERKLQ49MI3 558 aaPredicted RBP15□□□□□ -0.01
COL4A1-201ENST00000375820 ARHGAP27Q6ZUM4 889 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 PLA2G4DQ86XP0 818 aa15□□□□□ -0.01
COL4A1-201ENST00000375820 HACE1Q8IYU2 909 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms