RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 PHC3Q8NDX5 983 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 GRPEL2Q8TAA5 225 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 HSPH1Q92598 858 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 CPP00450 1065 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 PLEKHG4BQ96PX9 1271 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 C8orf74Q6P047 294 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 KRT27Q7Z3Y8 459 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 MOV10Q9HCE1 1003 aaKnown RBP9.56□□□□□ -0.88
ABCA1-202ENST00000374736 MAFFQ9ULX9 164 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 RAB3GAP2Q9H2M9 1393 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 MYH11P35749 1972 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 EVPLLA8MZ36 301 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 S100A6P06703 90 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 ALDH18A1P54886 795 aaKnown RBP9.56□□□□□ -0.88
ABCA1-202ENST00000374736 TRIM16O95361 564 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
ABCA1-202ENST00000374736 SH3D21A4FU49 640 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 RSPH10B2B2RC85 870 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 ANGPT2O15123 496 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 DCTN3O75935 186 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 RSPH10BP0C881 870 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 TRAPPC10P48553 1259 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 BNIP1Q12981 228 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 EP400NLQ6ZTU2 488 aa9.56□□□□□ -0.88
ABCA1-202ENST00000374736 CFAP221Q4G0U5 840 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 MAGEC3Q8TD91 643 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 KLHL29Q96CT2 875 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 OLFM1Q99784 485 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 GINS4Q9BRT9 223 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 SEC63Q9UGP8 760 aaKnown RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 H0Y626 953 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 CLASP2O75122 1294 aaKnown RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 RUNX1T1Q06455 604 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 EMBQ6PCB8 327 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 SIX5Q8N196 739 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 SDCCAG3Q96C92 435 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 TRIM8Q9BZR9 551 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 SMARCA1P28370 1054 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 OLFML2BQ68BL8 750 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 ERICH5Q6P6B1 374 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 STXBP4Q6ZWJ1 553 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 ZSCAN16Q9H4T2 348 aaPredicted RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 AP4S1Q9Y587 144 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 BFSP1Q12934 665 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 ARL6IP6Q8N6S5 226 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 TTC7AQ9ULT0 858 aaPredicted RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 TSPAN1O60635 241 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 RGS20O76081 388 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 PGM3O95394 542 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 HIBCHQ6NVY1 386 aaPredicted RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 AGTPBP1Q9UPW5 1226 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 TOMM70O94826 608 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 PREPLQ4J6C6 727 aaPredicted RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 ANKRD20A3Q5VUR7 823 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 C8orf4Q9NR00 106 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 SCRIBQ14160 1630 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 UBE4BO95155 1302 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 HSPA8P11142 646 aaKnown RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 TWF2Q6IBS0 349 aaKnown RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 ZNF530Q6P9A1 599 aaPredicted RBP9.55□□□□□ -0.88
ABCA1-202ENST00000374736 CCDC169A6NNP5 214 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 PDE9AO76083 593 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 HNRNPMP52272 730 aaKnown RBP eCLIP9.55□□□□□ -0.887e-7■■■□□ 18.8
ABCA1-202ENST00000374736 DDR1Q08345 913 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 LRRC8CQ8TDW0 803 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 VPS16Q9H269 839 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 B3GALNT1O75752 331 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 RGS2P41220 211 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 VPS37BQ9H9H4 285 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 SPC25Q9HBM1 224 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 RMND1Q9NWS8 449 aa9.55□□□□□ -0.88
ABCA1-202ENST00000374736 YEATS2Q9ULM3 1422 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 ABCC9O60706 1549 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 MCF2P10911 925 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 NUP62P37198 522 aaPredicted RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 ZNF579Q8NAF0 562 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 CYP46A1Q9Y6A2 500 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 CTNNA1P35221 906 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 GRIN1Q05586 938 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 ILF2Q12905 390 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 BMP2KLQ5H9B9 411 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 PARP2Q9UGN5 583 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 PUF60Q9UHX1 559 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 EPHB4P54760 987 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 ETF1P62495 437 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 TYRO3Q06418 890 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 AKNAD1Q5T1N1 836 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 DDI1Q8WTU0 396 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 CHAMP1Q96JM3 812 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 UBN1Q9NPG3 1134 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 RPAP1Q9BWH6 1393 aaPredicted RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 EIF3BP55884 814 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 PSME1Q06323 249 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 PCNX4Q63HM2 1172 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 EPS8L1Q8TE68 723 aa9.54□□□□□ -0.88
ABCA1-202ENST00000374736 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
ABCA1-202ENST00000374736 ZBED4O75132 1171 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms