RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
ABCA1-201ENST00000374733 TSEN34Q9BSV6 310 aaKnown RBP13.16□□□□□ -0.3
ABCA1-201ENST00000374733 PI4KBQ9UBF8 816 aa13.16□□□□□ -0.3
ABCA1-201ENST00000374733 ROBO3Q96MS0 1386 aa13.16□□□□□ -0.3
ABCA1-201ENST00000374733 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 MOXD2PA6NHM9 499 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 MECOMQ03112 1051 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 RALBP1Q15311 655 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 KCNA10Q16322 511 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
ABCA1-201ENST00000374733 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
ABCA1-201ENST00000374733 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 MYADML2A6NDP7 307 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 EYA2O00167 538 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 TLR3O15455 904 aaKnown RBP13.14□□□□□ -0.31
ABCA1-201ENST00000374733 AKR1A1P14550 325 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 GCGRP47871 477 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 GRB10Q13322 594 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 FAM126BQ8IXS8 530 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 ZNF384Q8TF68 577 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
ABCA1-201ENST00000374733 UBE2ZQ9H832 354 aaPredicted RBP13.14□□□□□ -0.31
ABCA1-201ENST00000374733 PTPRZ1P23471 2315 aaPredicted RBP13.13□□□□□ -0.31
ABCA1-201ENST00000374733 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
ABCA1-201ENST00000374733 GH2P01242 217 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 CDK7P50613 346 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 CCL23P55773 120 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 PLS1Q14651 629 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
ABCA1-201ENST00000374733 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 NCAPG2Q86XI2 1143 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 MFSD14AQ96MC6 490 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
ABCA1-201ENST00000374733 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 ELP1O95163 1332 aa13.13□□□□□ -0.31
ABCA1-201ENST00000374733 A0A0U1RQG5 324 aaPredicted RBP13.12□□□□□ -0.31
ABCA1-201ENST00000374733 ARVCFO00192 962 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 ARHGEF15O94989 841 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 KCNA5P22460 613 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 ADORA1P30542 326 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 CCDC102BQ68D86 513 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 PTCRAQ6ISU1 281 aaPredicted RBP13.12□□□□□ -0.31
ABCA1-201ENST00000374733 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 KLHDC9Q8NEP7 349 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.12□□□□□ -0.31
ABCA1-201ENST00000374733 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
ABCA1-201ENST00000374733 DHX36Q9H2U1 1008 aaKnown RBP13.12□□□□□ -0.31
ABCA1-201ENST00000374733 FAM86C1Q9NVL1 165 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 ZNF536O15090 1300 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 SCN5AQ14524 2016 aa13.12□□□□□ -0.31
ABCA1-201ENST00000374733 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
ABCA1-201ENST00000374733 ZNF865P0CJ78 1059 aaPredicted RBP13.11□□□□□ -0.31
ABCA1-201ENST00000374733 USP14P54578 494 aa13.11□□□□□ -0.31
ABCA1-201ENST00000374733 TAP1Q03518 808 aa13.11□□□□□ -0.31
ABCA1-201ENST00000374733 LEXMQ3ZCV2 418 aa13.11□□□□□ -0.31
ABCA1-201ENST00000374733 CCSAPQ6IQ19 270 aaPredicted RBP13.11□□□□□ -0.31
ABCA1-201ENST00000374733 SPRED2Q7Z698 418 aa13.11□□□□□ -0.31
ABCA1-201ENST00000374733 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
ABCA1-201ENST00000374733 TECTAO75443 2155 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 DMDP11532 3685 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 LPXNO60711 386 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 PGK2P07205 417 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 ASGR1P07306 291 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 C6orf222P0C671 652 aaPredicted RBP13.1□□□□□ -0.31
ABCA1-201ENST00000374733 FCER1AP12319 257 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 RAB3GAP1Q15042 981 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 ATG9AQ7Z3C6 839 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 ABRAQ8N0Z2 381 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 TINF2Q9BSI4 451 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 SIL1Q9H173 461 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 MROH8Q9H579 483 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
ABCA1-201ENST00000374733 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 CD4P01730 458 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 LDHCP07864 332 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 GSTO1P78417 241 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
ABCA1-201ENST00000374733 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 WNT8AQ9H1J5 351 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 SAP30BPQ9UHR5 308 aaKnown RBP13.09□□□□□ -0.31
ABCA1-201ENST00000374733 PCDHB3Q9Y5E6 796 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 MYH1P12882 1939 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 FLT1P17948 1338 aa13.09□□□□□ -0.31
ABCA1-201ENST00000374733 MCM3APO60318 1980 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms