RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 DOK7Q18PE1 504 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 ZNF219Q9P2Y4 722 aaPredicted RBP19.21■□□□□ 0.67
RXRB-201ENST00000374680 GSTO1P78417 241 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 DMTNQ08495 405 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 SOGA3Q5TF21 947 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 DYMQ7RTS9 669 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 CTAGE1Q96RT6 745 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 SLC16A2P36021 539 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 ASIC1P78348 528 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 CABP7Q86V35 215 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 ANKRD20A12PQ8NF67 263 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 TBCKQ8TEA7 893 aa19.2■□□□□ 0.66
RXRB-201ENST00000374680 MORC2Q9Y6X9 1032 aaPredicted RBP19.2■□□□□ 0.66
RXRB-201ENST00000374680 FAM196BA6NMK8 535 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 TMCO3Q6UWJ1 677 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 IRF2BP1Q8IU81 584 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 SLC35F6Q8N357 371 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 RWDD2AQ9UIY3 292 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 GUCA1BQ9UMX6 200 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 UTRNP46939 3433 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 IRS2Q9Y4H2 1338 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 PALM3A6NDB9 673 aaPredicted RBP19.19■□□□□ 0.66
RXRB-201ENST00000374680 B4DLN1 442 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 MPHOSPH10O00566 681 aaKnown RBP19.19■□□□□ 0.66
RXRB-201ENST00000374680 PDE4DQ08499 809 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 SEC63Q9UGP8 760 aaKnown RBP19.19■□□□□ 0.66
RXRB-201ENST00000374680 FLT1P17948 1338 aa19.19■□□□□ 0.66
RXRB-201ENST00000374680 ERICH4A6NGS2 130 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 KIF5CO60282 957 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 H2AFXP16104 143 aaPredicted RBP19.18■□□□□ 0.66
RXRB-201ENST00000374680 PBX1P40424 430 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 GNAQP50148 359 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 PANX2Q96RD6 677 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 ZCCHC17Q9NP64 241 aaKnown RBP19.18■□□□□ 0.66
RXRB-201ENST00000374680 SLC39A2Q9NP94 309 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 TCP11L1Q9NUJ3 509 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 STK4Q13043 487 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 FCHSD1Q86WN1 690 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 CCDC148Q8NFR7 591 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 HINFPQ9BQA5 517 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 TTC26A0AVF1 554 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 ENC1O14682 589 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 CACNB3P54284 484 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 RRP36Q96EU6 259 aaKnown RBP19.18■□□□□ 0.66
RXRB-201ENST00000374680 ABHD10Q9NUJ1 306 aa19.18■□□□□ 0.66
RXRB-201ENST00000374680 ARL6IP4Q66PJ3 421 aaKnown RBP19.17■□□□□ 0.66
RXRB-201ENST00000374680 DPP8Q6V1X1 898 aaPredicted RBP19.17■□□□□ 0.66
RXRB-201ENST00000374680 MRFAP1Q9Y605 127 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 RHOXF2BP0C7M4 288 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 IDEP14735 1019 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 NONOQ15233 471 aaKnown RBP eCLIP19.17■□□□□ 0.66
RXRB-201ENST00000374680 UBE2SQ16763 222 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 TTBK2Q6IQ55 1244 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 CNGA4Q8IV77 575 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 CSGALNACT2Q8N6G5 542 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 RHOXF2Q9BQY4 288 aa19.17■□□□□ 0.66
RXRB-201ENST00000374680 M0R2N6 131 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 PNMA6AP0CW24 399 aaPredicted RBP19.16■□□□□ 0.66
RXRB-201ENST00000374680 TNNI2P48788 182 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 PARD6BQ9BYG5 372 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 RMND1Q9NWS8 449 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 FHOD1Q9Y613 1164 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 AHDC1Q5TGY3 1603 aaPredicted RBP19.16■□□□□ 0.66
RXRB-201ENST00000374680 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 TDP2O95551 362 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 GYS1P13807 737 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 AKR1B1P15121 316 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 SHROOM1Q2M3G4 852 aaPredicted RBP19.16■□□□□ 0.66
RXRB-201ENST00000374680 ADSSL1Q8N142 457 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 TBC1D16Q8TBP0 767 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 AGPAT5Q9NUQ2 364 aa19.16■□□□□ 0.66
RXRB-201ENST00000374680 POTEMA6NI47 508 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 SSBP05455 408 aaKnown RBP eCLIP19.15■□□□□ 0.66
RXRB-201ENST00000374680 OR52Z1P0C646 297 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 PPP4CP60510 307 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 C6orf50Q9HD87 102 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 MAGEC2Q9UBF1 373 aaPredicted RBP19.15■□□□□ 0.66
RXRB-201ENST00000374680 LIMA1Q9UHB6 759 aaKnown RBP19.15■□□□□ 0.66
RXRB-201ENST00000374680 EFCAB8A8MWE9 144 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 KLRC4O43908 158 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 RHBDL3P58872 404 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 TCP10Q12799 353 aa19.15■□□□□ 0.66
RXRB-201ENST00000374680 BMS1Q14692 1282 aaKnown RBP19.15■□□□□ 0.66
RXRB-201ENST00000374680 GOLGA6L9A6NEM1 432 aa19.14■□□□□ 0.66
RXRB-201ENST00000374680 ST5P78524 1137 aa19.14■□□□□ 0.66
RXRB-201ENST00000374680 RAD51AP2Q09MP3 1159 aa19.14■□□□□ 0.66
RXRB-201ENST00000374680 LRRC41Q15345 812 aa19.14■□□□□ 0.66
RXRB-201ENST00000374680 ANKRD40Q6AI12 368 aa19.14■□□□□ 0.66
RXRB-201ENST00000374680 KCTD1Q719H9 257 aa19.14■□□□□ 0.66
RXRB-201ENST00000374680 ARGLU1Q9NWB6 273 aaPredicted RBP19.14■□□□□ 0.66
RXRB-201ENST00000374680 PCDHAC2Q9Y5I4 1007 aa19.14■□□□□ 0.66
RXRB-201ENST00000374680 PSMA7O14818 248 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 MARCH6O60337 910 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 MTIF2P46199 727 aaKnown RBP19.14■□□□□ 0.65
RXRB-201ENST00000374680 MCM6Q14566 821 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 NUDT12Q9BQG2 462 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 DDX4Q9NQI0 724 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms