RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.98■□□□□ 0.47
NIPAL3-204ENST00000374399 DCPSQ96C86 337 aaKnown RBP17.98■□□□□ 0.47
NIPAL3-204ENST00000374399 SH2D4AQ9H788 454 aa17.98■□□□□ 0.47
NIPAL3-204ENST00000374399 C6orf50Q9HD87 102 aa17.98■□□□□ 0.47
NIPAL3-204ENST00000374399 DACT1Q9NYF0 836 aa17.98■□□□□ 0.47
NIPAL3-204ENST00000374399 FBXO2Q9UK22 296 aaPredicted RBP17.98■□□□□ 0.47
NIPAL3-204ENST00000374399 PARP14Q460N5 1801 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 SYCE3A1L190 88 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 EDIL3O43854 480 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 PTPRAP18433 802 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 GNA11P29992 359 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 TRAPPC10P48553 1259 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 SUPT20HL1Q3ZLR7 823 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 TTC38Q5R3I4 469 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 SHC4Q6S5L8 630 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 WDR18Q9BV38 432 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 TAF1DQ9H5J8 278 aaPredicted RBP17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
NIPAL3-204ENST00000374399 TAL1P17542 331 aaPredicted RBP17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 PTPREP23469 700 aa17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 CLK2P49760 499 aaKnown RBP17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 STAT2P52630 851 aa17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 NOL9Q5SY16 702 aaKnown RBP17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 C4orf32Q8N8J7 132 aa17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 FSIP1Q8NA03 581 aa17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 EMILIN3Q9NT22 766 aa17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 FBXO28Q9NVF7 368 aa17.96■□□□□ 0.47
NIPAL3-204ENST00000374399 A0A1B0GVL5 298 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 CMA1P23946 247 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 ZNF174Q15697 407 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 KRT26Q7Z3Y9 468 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 SULF1Q8IWU6 871 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 ZC3H15Q8WU90 426 aaKnown RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 BIN2Q9UBW5 565 aaPredicted RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 NOL7Q9UMY1 257 aaKnown RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 RLFQ13129 1914 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 FAM237AA0A1B0GTK4 181 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 ADCY7P51828 1080 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 NDUFA8P51970 172 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 MTMR2Q13614 643 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 INF2Q27J81 1249 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 FMR1NBQ8N0W7 255 aaPredicted RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 SYAP1Q96A49 352 aaPredicted RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 FEZ1Q99689 392 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 RANBP17Q9H2T7 1088 aaKnown RBP17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
NIPAL3-204ENST00000374399 CCDC194A0A1B0GVG4 234 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 OPLAHO14841 1288 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 CUTAO60888 179 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 FAM160A1Q05DH4 1040 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 SPP2Q13103 211 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 PRKG1Q13976 671 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 KRT25Q7Z3Z0 450 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 REXO1Q8N1G1 1221 aaKnown RBP17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 KRI1Q8N9T8 703 aaKnown RBP17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 HPSEQ9Y251 543 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 SRPRBQ9Y5M8 271 aaKnown RBP17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 MYH7BA7E2Y1 1941 aa17.94■□□□□ 0.46
NIPAL3-204ENST00000374399 WDR46O15213 610 aaKnown RBP17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 BACE1P56817 501 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 ATP2C1P98194 919 aaPredicted RBP17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 IKQ13123 557 aaPredicted RBP17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 UBE2SQ16763 222 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 RESP18Q5W5W9 173 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 RBM43Q6ZSC3 357 aaKnown RBP17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 JMYQ8N9B5 988 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 LPAR1Q92633 364 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 P2RX7Q99572 595 aaKnown RBP17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 AMNQ9BXJ7 453 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 CLSTN2Q9H4D0 955 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 DDX19AQ9NUU7 478 aaKnown RBP17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 FEM1BQ9UK73 627 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 SNCAIPQ9Y6H5 919 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 PTPRFP10586 1907 aa17.93■□□□□ 0.46
NIPAL3-204ENST00000374399 VCAM1P19320 739 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 PTGDRQ13258 359 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 IL17AQ16552 155 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 CAMK4Q16566 473 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 LRSAM1Q6UWE0 723 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 FBXO11Q86XK2 927 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 ZNF280CQ8ND82 737 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 CHURC1Q8WUH1 139 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 CEP131Q9UPN4 1083 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 ZHX2Q9Y6X8 837 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 MEIS2O14770 477 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 PFKFB1P16118 471 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 MCM7P33993 719 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 VGLL4Q14135 290 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 NONOQ15233 471 aaKnown RBP eCLIP17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 FAM160B2Q86V87 743 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 CUL5Q93034 780 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 CDCA5Q96FF9 252 aa17.92■□□□□ 0.46
NIPAL3-204ENST00000374399 FUCA2Q9BTY2 467 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms