RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 ARHGAP25P42331 645 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 ZNF444Q8N0Y2 327 aaPredicted RBP12.8□□□□□ -0.36
PTPN20-204ENST00000374346 GIMAP8Q8ND71 665 aaPredicted RBP12.8□□□□□ -0.36
PTPN20-204ENST00000374346 GPKOWQ92917 476 aaPredicted RBP eCLIP12.8□□□□□ -0.36
PTPN20-204ENST00000374346 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 MYH1P12882 1939 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 TTC26A0AVF1 554 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 PSMD14O00487 310 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 BAG3O95817 575 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 RHOXF2BP0C7M4 288 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 CYP2D6P10635 497 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 TRIM21P19474 475 aaKnown RBP12.8□□□□□ -0.36
PTPN20-204ENST00000374346 GSTO1P78417 241 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 AMPD3Q01432 767 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 MAP9Q49MG5 647 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 HEATR3Q7Z4Q2 680 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
PTPN20-204ENST00000374346 IQCDQ96DY2 449 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 RHOXF2Q9BQY4 288 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 ZCCHC17Q9NP64 241 aaKnown RBP12.8□□□□□ -0.36
PTPN20-204ENST00000374346 KBTBD4Q9NVX7 518 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
PTPN20-204ENST00000374346 PCDHA6Q9UN73 950 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 PCDHA8Q9Y5H6 950 aa12.8□□□□□ -0.36
PTPN20-204ENST00000374346 ZBTB22O15209 634 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 CCDC122Q5T0U0 273 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 C12orf60Q5U649 245 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 ZNF662Q6ZS27 426 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 KIAA1328Q86T90 577 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 CSGALNACT2Q8N6G5 542 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 PNKPQ96T60 521 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 EXOC1Q9NV70 894 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 BARHL2Q9NY43 387 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 TFCP2L1Q9NZI6 479 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 ADAM21Q9UKJ8 722 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 L1RE1Q9UN81 338 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 FAM205AQ6ZU69 1335 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 TRIM49BA6NDI0 452 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 M0R2N6 131 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 CKAP4Q07065 602 aaKnown RBP12.79□□□□□ -0.36
PTPN20-204ENST00000374346 CHP1Q99653 195 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 SAR1BQ9Y6B6 198 aa12.79□□□□□ -0.36
PTPN20-204ENST00000374346 ZNF831Q5JPB2 1677 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 ROBO1Q9Y6N7 1651 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
PTPN20-204ENST00000374346 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
PTPN20-204ENST00000374346 USP17L8P0C7I0 530 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
PTPN20-204ENST00000374346 GNA11P29992 359 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 AMPD2Q01433 879 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 INF2Q27J81 1249 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 IQCEQ6IPM2 695 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 WDR93Q6P2C0 686 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
PTPN20-204ENST00000374346 IRF2BP1Q8IU81 584 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 CERS3Q8IU89 383 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 TUBGCP2Q9BSJ2 902 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 PDE11AQ9HCR9 933 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 ABCB6Q9NP58 842 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 IL17RBQ9NRM6 502 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 SRGNP10124 158 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 KLRK1P26718 216 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
PTPN20-204ENST00000374346 ST5P78524 1137 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 TRAPPC11Q7Z392 1133 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 KRT25Q7Z3Z0 450 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
PTPN20-204ENST00000374346 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.36
PTPN20-204ENST00000374346 EVX2Q03828 476 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 MUM1L1Q5H9M0 696 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 FKBP15Q5T1M5 1219 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 LEKR1Q6ZMV7 388 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 CABP7Q86V35 215 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 NEK11Q8NG66 645 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
PTPN20-204ENST00000374346 TSGA10Q9BZW7 698 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 MED4Q9NPJ6 270 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 VPS18Q9P253 973 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 STX8Q9UNK0 236 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 KLRC4O43908 158 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 LDHCP07864 332 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 OR52Z1P0C646 297 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 CCNE1P24864 410 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 VSNL1P62760 191 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 ZBED6P86452 979 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 PDE4DQ08499 809 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 CASP8Q14790 479 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 MEA1Q16626 185 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 TBC1D9BQ66K14 1250 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms