RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 FAM114A1Q8IWE2 563 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 KRT222Q8N1A0 295 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CTAGE15A4D2H0 777 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 TBCAO75347 108 aaKnown RBP13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CTAGE8P0CG41 777 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CERKLQ49MI3 558 aaPredicted RBP13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CTAGE6Q86UF2 777 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 DGKHQ86XP1 1220 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CTAGE4Q8IX94 777 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 ARFGAP3Q9NP61 516 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 USP17L15C9J2P7 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L11C9JVI0 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L18D6R9N7 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L22D6RA61 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L19D6RCP7 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L20D6RJB6 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 AKR1B1P15121 316 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L24Q0WX57 530 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 PRKG1Q13976 671 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 E4F1Q66K89 784 aaPredicted RBP13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 TICAM2Q86XR7 235 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 TMEM60Q9H2L4 133 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 PCDHA12Q9UN75 941 aa13.21□□□□□ -0.3
PACSIN1-202ENST00000374043 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 CYLC1P35663 651 aaPredicted RBP13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 NCBP1Q09161 790 aaKnown RBP13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 BMS1Q14692 1282 aaKnown RBP13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 LARGE2Q8N3Y3 721 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 KANSL2Q9H9L4 492 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 KRT31Q15323 416 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 SYCP1Q15431 976 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 PRCPP42785 496 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 SEC23AQ15436 765 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 VPS72Q15906 364 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 TXNRD1Q16881 649 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 SLFN13Q68D06 897 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
PACSIN1-202ENST00000374043 BICDL2A1A5D9 508 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 RDH13Q8NBN7 331 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 WNT7AO00755 349 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 SORBS3O60504 671 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 ICA1Q05084 483 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 RAPGEF1Q13905 1077 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 RRAGAQ7L523 313 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 TBC1D16Q8TBP0 767 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 GOLGA1Q92805 767 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 TDP2O95551 362 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 PRPF4BQ13523 1007 aaKnown RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 DDX25Q9UHL0 483 aaKnown RBP13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
PACSIN1-202ENST00000374043 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 HSPA1LP34931 641 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 PKN1Q16512 942 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 NEK11Q8NG66 645 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 TDRD3Q9H7E2 651 aaKnown RBP13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 DISC1Q9NRI5 854 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 CHRNA5P30532 468 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 MRPS25P82663 173 aaKnown RBP13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 WDR78Q5VTH9 848 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 CNNM4Q6P4Q7 775 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 TUBGCP2Q9BSJ2 902 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 NLGN1Q8N2Q7 840 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 SLC35F6Q8N357 371 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 TUBE1Q9UJT0 475 aa13.18□□□□□ -0.3
PACSIN1-202ENST00000374043 ORC4O43929 436 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 FCER1AP12319 257 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 RASA1P20936 1047 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 SMCR8Q8TEV9 937 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms