RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ARHGAP39Q9C0H5 1083 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 VWA5AO00534 786 aa23.65■■□□□ 1.38
SYNC-201ENST00000373484 PSMA5P28066 241 aa23.65■■□□□ 1.38
SYNC-201ENST00000373484 CTGFP29279 349 aa23.65■■□□□ 1.38
SYNC-201ENST00000373484 CCDC183Q5T5S1 534 aa23.65■■□□□ 1.38
SYNC-201ENST00000373484 FRMPD2Q68DX3 1309 aaPredicted RBP23.64■■□□□ 1.38
SYNC-201ENST00000373484 GPATCH4Q5T3I0 446 aaKnown RBP23.64■■□□□ 1.38
SYNC-201ENST00000373484 BLOC1S2Q6QNY1 142 aa23.64■■□□□ 1.38
SYNC-201ENST00000373484 BTNL9Q6UXG8 535 aa23.64■■□□□ 1.38
SYNC-201ENST00000373484 TMTC2Q8N394 836 aa23.64■■□□□ 1.38
SYNC-201ENST00000373484 KIFC2Q96AC6 838 aa23.64■■□□□ 1.38
SYNC-201ENST00000373484 TCEANC2Q96MN5 208 aa23.64■■□□□ 1.38
SYNC-201ENST00000373484 MYH6P13533 1939 aa23.64■■□□□ 1.37
SYNC-201ENST00000373484 CPA1P15085 419 aa23.63■■□□□ 1.37
SYNC-201ENST00000373484 IKQ13123 557 aaPredicted RBP23.63■■□□□ 1.37
SYNC-201ENST00000373484 REPS2Q8NFH8 660 aa23.63■■□□□ 1.37
SYNC-201ENST00000373484 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.63■■□□□ 1.37
SYNC-201ENST00000373484 CASTP20810 708 aaKnown RBP23.63■■□□□ 1.37
SYNC-201ENST00000373484 PSMC4P43686 418 aa23.63■■□□□ 1.37
SYNC-201ENST00000373484 TTBK2Q6IQ55 1244 aa23.63■■□□□ 1.37
SYNC-201ENST00000373484 TRIM47Q96LD4 638 aa23.63■■□□□ 1.37
SYNC-201ENST00000373484 TM6SF1Q9BZW5 370 aa23.63■■□□□ 1.37
SYNC-201ENST00000373484 GPCPD1Q9NPB8 672 aa23.63■■□□□ 1.37
SYNC-201ENST00000373484 PLXNB2O15031 1838 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 UQCRHLA0A096LP55 91 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 UQCRHP07919 91 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 TROAPQ12815 778 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 TMEM132BQ14DG7 1078 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 ARHGEF6Q15052 776 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 ASPRV1Q53RT3 343 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 CTU1Q7Z7A3 348 aaKnown RBP23.62■■□□□ 1.37
SYNC-201ENST00000373484 SGMS1Q86VZ5 419 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 SPATC1LQ9H0A9 340 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 SLC38A10Q9HBR0 1119 aa23.62■■□□□ 1.37
SYNC-201ENST00000373484 ECM2O94769 699 aaPredicted RBP23.61■■□□□ 1.37
SYNC-201ENST00000373484 PARP1P09874 1014 aaKnown RBP23.61■■□□□ 1.37
SYNC-201ENST00000373484 GOLGA8HP0CJ92 632 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 FDX1P10109 184 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 RPS6KB1P23443 525 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 FCGRTP55899 365 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 UBE2HP62256 183 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 CCNA1P78396 465 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 OTOP1Q7RTM1 612 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 CATIPQ7Z7H3 387 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 ZNF654Q8IZM8 581 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 PORCNQ9H237 461 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 EFCC1Q9HA90 598 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 ZSWIM6Q9HCJ5 1215 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 ZNF214Q9UL59 606 aaPredicted RBP23.61■■□□□ 1.37
SYNC-201ENST00000373484 PRR12Q9ULL5 1215 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 GNRH1P01148 92 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 SLC16A2P36021 539 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 PRIMPOLQ96LW4 560 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 TRIM17Q9Y577 477 aa23.61■■□□□ 1.37
SYNC-201ENST00000373484 CCDC69A6NI79 296 aa23.6■■□□□ 1.37
SYNC-201ENST00000373484 ZBED4O75132 1171 aa23.6■■□□□ 1.37
SYNC-201ENST00000373484 FMNL1O95466 1100 aaPredicted RBP23.6■■□□□ 1.37
SYNC-201ENST00000373484 ZSCAN22P10073 491 aaPredicted RBP23.6■■□□□ 1.37
SYNC-201ENST00000373484 GRM4Q14833 912 aa23.6■■□□□ 1.37
SYNC-201ENST00000373484 SYDE2Q5VT97 1194 aa23.6■■□□□ 1.37
SYNC-201ENST00000373484 NFXL1Q6ZNB6 911 aa23.6■■□□□ 1.37
SYNC-201ENST00000373484 RUFY3Q7L099 469 aa23.6■■□□□ 1.37
SYNC-201ENST00000373484 SMCHD1A6NHR9 2005 aa23.6■■□□□ 1.37
SYNC-201ENST00000373484 ZNFX1Q9P2E3 1918 aaKnown RBP23.6■■□□□ 1.37
SYNC-201ENST00000373484 ATP2A1O14983 1001 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 DDAH1O94760 285 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 PTMAP06454 111 aaKnown RBP23.59■■□□□ 1.37
SYNC-201ENST00000373484 HMGN5P82970 282 aaKnown RBP23.59■■□□□ 1.37
SYNC-201ENST00000373484 FBXL16Q8N461 479 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 MOV10L1Q9BXT6 1211 aaKnown RBP23.59■■□□□ 1.37
SYNC-201ENST00000373484 MAD2L2Q9UI95 211 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 LIMCH1Q9UPQ0 1083 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 PALM3A6NDB9 673 aaPredicted RBP23.59■■□□□ 1.37
SYNC-201ENST00000373484 TNPO2O14787 897 aaKnown RBP23.59■■□□□ 1.37
SYNC-201ENST00000373484 MAPK4P31152 587 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 PLS1Q14651 629 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 COL13A1Q5TAT6 717 aaPredicted RBP23.59■■□□□ 1.37
SYNC-201ENST00000373484 STAG2Q8N3U4 1231 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 MAP3K14Q99558 947 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 ZMYND15Q9H091 742 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 CYP46A1Q9Y6A2 500 aa23.59■■□□□ 1.37
SYNC-201ENST00000373484 OAZ1P54368 228 aa23.58■■□□□ 1.37
SYNC-201ENST00000373484 Q6ZUG5 572 aa23.58■■□□□ 1.37
SYNC-201ENST00000373484 SHCBP1Q8NEM2 672 aa23.58■■□□□ 1.37
SYNC-201ENST00000373484 MYL10Q9BUA6 226 aa23.58■■□□□ 1.37
SYNC-201ENST00000373484 AGXT2Q9BYV1 514 aa23.58■■□□□ 1.37
SYNC-201ENST00000373484 CTDP1Q9Y5B0 961 aaPredicted RBP23.58■■□□□ 1.37
SYNC-201ENST00000373484 SLC12A7Q9Y666 1083 aa23.58■■□□□ 1.37
SYNC-201ENST00000373484 TPM3P06753 285 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 STAT3P40763 770 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 RIOX2Q8IUF8 465 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 CCAR1Q8IX12 1150 aaKnown RBP23.57■■□□□ 1.36
SYNC-201ENST00000373484 NUP133Q8WUM0 1156 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 PIBF1Q8WXW3 757 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 ZSCAN31Q96LW9 406 aaPredicted RBP23.57■■□□□ 1.36
SYNC-201ENST00000373484 TEX13BQ9BXU2 312 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 RANBP17Q9H2T7 1088 aaKnown RBP23.57■■□□□ 1.36
SYNC-201ENST00000373484 CPVLQ9H3G5 476 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 ZNF236Q9UL36 1845 aa23.57■■□□□ 1.36
SYNC-201ENST00000373484 BAZ2BQ9UIF8 2168 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms