RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 FKBP15Q5T1M5 1219 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 CCNI2Q6ZMN8 369 aaPredicted RBP16.58■□□□□ 0.25
COL9A2-202ENST00000372748 HDAC7Q8WUI4 952 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 PLIN2Q99541 437 aa16.58■□□□□ 0.25
COL9A2-202ENST00000372748 MCM3P25205 808 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 FUT2Q10981 343 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
COL9A2-202ENST00000372748 TADA2BQ86TJ2 420 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 GPIHBP1Q8IV16 184 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 EFCAB13Q8IY85 973 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 RRP36Q96EU6 259 aaKnown RBP16.58■□□□□ 0.24
COL9A2-202ENST00000372748 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.24
COL9A2-202ENST00000372748 DNAJC7Q99615 494 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 ARAP2Q8WZ64 1704 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 MYH2Q9UKX2 1941 aa16.58■□□□□ 0.24
COL9A2-202ENST00000372748 B4DLN1 442 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 VEGFAP15692 232 aaPredicted RBP16.57■□□□□ 0.24
COL9A2-202ENST00000372748 MATR3P43243 847 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL9A2-202ENST00000372748 DDB1Q16531 1140 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 ERFEQ4G0M1 354 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
COL9A2-202ENST00000372748 BRMS1Q9HCU9 246 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 KRT86O43790 486 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 NMT2O60551 498 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 IRAK1P51617 712 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 PSMB7Q99436 277 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 RIOK1Q9BRS2 568 aaKnown RBP16.57■□□□□ 0.24
COL9A2-202ENST00000372748 TAF1P21675 1872 aa16.57■□□□□ 0.24
COL9A2-202ENST00000372748 TARSL2A2RTX5 802 aaKnown RBP16.56■□□□□ 0.24
COL9A2-202ENST00000372748 LGALS16A8MUM7 142 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
COL9A2-202ENST00000372748 SND1Q7KZF4 910 aaKnown RBP eCLIP16.56■□□□□ 0.247e-7■■■□□ 18
COL9A2-202ENST00000372748 TNFRSF25Q93038 417 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 TIAM2Q8IVF5 1701 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 PRPF3O43395 683 aaKnown RBP16.56■□□□□ 0.24
COL9A2-202ENST00000372748 BMP15O95972 392 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 CKAP4Q07065 602 aaKnown RBP16.56■□□□□ 0.24
COL9A2-202ENST00000372748 RASSF8Q8NHQ8 419 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 JAG2Q9Y219 1238 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 LTBP4Q8N2S1 1624 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 H7C1D1 291 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 KRT83P78385 493 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 ANKRD18AQ8IVF6 992 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 ZNF384Q8TF68 577 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 TRIM47Q96LD4 638 aa16.56■□□□□ 0.24
COL9A2-202ENST00000372748 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
COL9A2-202ENST00000372748 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
COL9A2-202ENST00000372748 BAZ2AQ9UIF9 1905 aaKnown RBP16.55■□□□□ 0.24
COL9A2-202ENST00000372748 PP2D1A8MPX8 630 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 USP17L21D6R901 530 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 KLRK1P26718 216 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 STAT6P42226 847 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 SLC7A5Q01650 507 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 BCAS4Q8TDM0 211 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 POLD4Q9HCU8 107 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 SMARCAL1Q9NZC9 954 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 DMGDHQ9UI17 866 aaKnown RBP16.55■□□□□ 0.24
COL9A2-202ENST00000372748 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 MYH6P13533 1939 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 RTL9Q8NET4 1388 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 A0A087WUV0 522 aaPredicted RBP16.55■□□□□ 0.24
COL9A2-202ENST00000372748 KCNQ2O43526 872 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 IPO7O95373 1038 aaKnown RBP16.55■□□□□ 0.24
COL9A2-202ENST00000372748 NLRP5P59047 1200 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 ADSSL1Q8N142 457 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 MARCH10Q8NA82 808 aaPredicted RBP16.55■□□□□ 0.24
COL9A2-202ENST00000372748 ZNF507Q8TCN5 953 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 KAT2BQ92831 832 aa16.55■□□□□ 0.24
COL9A2-202ENST00000372748 COL1A1P02452 1464 aaPredicted RBP16.55■□□□□ 0.24
COL9A2-202ENST00000372748 MYH14Q7Z406 1995 aaKnown RBP16.54■□□□□ 0.24
COL9A2-202ENST00000372748 GUCY2CP25092 1073 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 LRRC1Q9BTT6 524 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 RMND1Q9NWS8 449 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 FAM169AQ9Y6X4 670 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 ROBO1Q9Y6N7 1651 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 SHOX2O60902 331 aaPredicted RBP16.54■□□□□ 0.24
COL9A2-202ENST00000372748 CXCR5P32302 372 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 CELF1Q92879 486 aaKnown RBP16.54■□□□□ 0.24
COL9A2-202ENST00000372748 RPGRIP1Q96KN7 1286 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 CAPS2Q9BXY5 557 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 NHSL1Q5SYE7 1610 aa16.54■□□□□ 0.24
COL9A2-202ENST00000372748 EBAG9O00559 213 aa16.53■□□□□ 0.24
COL9A2-202ENST00000372748 ERLIN2O94905 339 aa16.53■□□□□ 0.24
COL9A2-202ENST00000372748 PLEKP08567 350 aaPredicted RBP16.53■□□□□ 0.24
COL9A2-202ENST00000372748 RCAN1P53805 252 aa16.53■□□□□ 0.24
COL9A2-202ENST00000372748 GNGT1P63211 74 aa16.53■□□□□ 0.24
COL9A2-202ENST00000372748 TROAPQ12815 778 aa16.53■□□□□ 0.24
COL9A2-202ENST00000372748 CAVIN4Q5BKX8 364 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms